Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
LDB3O75112 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LDB3O75112 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LDB3O75112 AL079343.1-201ENST00000572358 1771 ntBASIC3.85□□□□□ -1.79
LDB3O75112 RNA5SP388-201ENST00000362584 119 ntBASIC3.85□□□□□ -1.79
LDB3O75112 SNORD35B-201ENST00000363660 87 ntBASIC3.85□□□□□ -1.79
LDB3O75112 RNA5SP130-201ENST00000364431 114 ntBASIC3.85□□□□□ -1.79
LDB3O75112 RHOT1P2-201ENST00000366423 333 ntBASIC3.85□□□□□ -1.79
LDB3O75112 RNU6-1279P-201ENST00000383917 103 ntBASIC3.85□□□□□ -1.79
LDB3O75112 Y_RNA.390-201ENST00000383932 102 ntBASIC3.85□□□□□ -1.79
LDB3O75112 MIR649-201ENST00000384843 97 ntBASIC3.85□□□□□ -1.79
LDB3O75112 MIR93-201ENST00000385024 80 ntBASIC3.85□□□□□ -1.79
LDB3O75112 MIR513A2-201ENST00000385249 127 ntBASIC3.85□□□□□ -1.79
LDB3O75112 RPL23AP29-201ENST00000397284 453 ntBASIC3.85□□□□□ -1.79
LDB3O75112 AL022722.2-201ENST00000402519 180 ntBASIC3.85□□□□□ -1.79
LDB3O75112 AL160275.2-201ENST00000412010 394 ntBASIC3.85□□□□□ -1.79
LDB3O75112 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.85□□□□□ -1.79
LDB3O75112 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.85□□□□□ -1.79
LDB3O75112 AC096632.1-201ENST00000427395 310 ntBASIC3.85□□□□□ -1.79
LDB3O75112 RPL36P19-201ENST00000430744 301 ntBASIC3.85□□□□□ -1.79
LDB3O75112 AL358472.1-201ENST00000431295 329 ntBASIC3.85□□□□□ -1.79
LDB3O75112 AL356276.2-201ENST00000435919 558 ntBASIC3.85□□□□□ -1.79
LDB3O75112 AL671855.1-201ENST00000446875 1203 ntBASIC3.85□□□□□ -1.79
LDB3O75112 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.85□□□□□ -1.79
LDB3O75112 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.85□□□□□ -1.79
LDB3O75112 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.85□□□□□ -1.79
LDB3O75112 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.85□□□□□ -1.79
LDB3O75112 RPL38P1-201ENST00000460914 211 ntBASIC3.85□□□□□ -1.79
LDB3O75112 AC116337.2-201ENST00000477662 156 ntBASIC3.85□□□□□ -1.79
LDB3O75112 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.85□□□□□ -1.79
LDB3O75112 MTAPP1-201ENST00000489154 819 ntBASIC3.85□□□□□ -1.79
LDB3O75112 RPL29P14-201ENST00000495837 428 ntBASIC3.85□□□□□ -1.79
LDB3O75112 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.85□□□□□ -1.79
LDB3O75112 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LDB3O75112 AC017037.1-201ENST00000508460 471 ntBASIC3.85□□□□□ -1.79
LDB3O75112 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
LDB3O75112 AC018797.3-201ENST00000513388 1241 ntBASIC3.85□□□□□ -1.79
LDB3O75112 RNA5SP154-201ENST00000516193 111 ntBASIC3.85□□□□□ -1.79
LDB3O75112 RNU7-143P-201ENST00000516781 65 ntBASIC3.85□□□□□ -1.79
LDB3O75112 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.85□□□□□ -1.79
LDB3O75112 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.85□□□□□ -1.79
LDB3O75112 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.85□□□□□ -1.79
LDB3O75112 OR5M7P-201ENST00000526140 972 ntBASIC3.85□□□□□ -1.79
LDB3O75112 AP003392.2-201ENST00000527269 208 ntBASIC3.85□□□□□ -1.79
LDB3O75112 DEFB109D-201ENST00000529497 240 ntBASIC3.85□□□□□ -1.79
LDB3O75112 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.85□□□□□ -1.79
LDB3O75112 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.85□□□□□ -1.79
LDB3O75112 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.85□□□□□ -1.79
LDB3O75112 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.85□□□□□ -1.79
LDB3O75112 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.85□□□□□ -1.79
LDB3O75112 AC009063.1-201ENST00000563342 702 ntBASIC3.85□□□□□ -1.79
LDB3O75112 MIR4504-201ENST00000577413 92 ntBASIC3.85□□□□□ -1.79
LDB3O75112 AC012417.1-201ENST00000582307 1039 ntBASIC3.85□□□□□ -1.79
LDB3O75112 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.85□□□□□ -1.79
LDB3O75112 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.85□□□□□ -1.79
LDB3O75112 NDUFA8P1-201ENST00000605525 367 ntBASIC3.85□□□□□ -1.79
LDB3O75112 AC015813.4-201ENST00000610469 179 ntBASIC3.85□□□□□ -1.79
LDB3O75112 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
LDB3O75112 MIR7151-201ENST00000617477 60 ntBASIC3.85□□□□□ -1.79
LDB3O75112 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.85□□□□□ -1.79
LDB3O75112 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.85□□□□□ -1.79
LDB3O75112 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LDB3O75112 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
LDB3O75112 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LDB3O75112 AC011266.1-201ENST00000624119 3569 ntBASIC3.85□□□□□ -1.79
LDB3O75112 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LDB3O75112 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LDB3O75112 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
LDB3O75112 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.85□□□□□ -1.79
LDB3O75112 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
LDB3O75112 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.85□□□□□ -1.79
LDB3O75112 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LDB3O75112 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
LDB3O75112 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LDB3O75112 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LDB3O75112 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.84□□□□□ -1.79
LDB3O75112 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.84□□□□□ -1.79
LDB3O75112 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LDB3O75112 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.84□□□□□ -1.79
LDB3O75112 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
LDB3O75112 OR10J6P-201ENST00000289731 930 ntBASIC3.84□□□□□ -1.79
LDB3O75112 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
LDB3O75112 RNU6-433P-201ENST00000363216 104 ntBASIC3.84□□□□□ -1.79
LDB3O75112 RNU5E-4P-201ENST00000364931 120 ntBASIC3.84□□□□□ -1.79
LDB3O75112 Y_RNA.302-201ENST00000364997 102 ntBASIC3.84□□□□□ -1.79
LDB3O75112 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.84□□□□□ -1.79
LDB3O75112 RPS24P12-201ENST00000402084 394 ntBASIC3.84□□□□□ -1.79
LDB3O75112 HSPE1P12-201ENST00000412576 301 ntBASIC3.84□□□□□ -1.79
LDB3O75112 AL133384.1-201ENST00000412744 351 ntBASIC3.84□□□□□ -1.79
LDB3O75112 RPS3AP9-201ENST00000417027 792 ntBASIC3.84□□□□□ -1.79
LDB3O75112 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LDB3O75112 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.84□□□□□ -1.79
LDB3O75112 DPPA2P1-201ENST00000428060 556 ntBASIC3.84□□□□□ -1.79
LDB3O75112 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.84□□□□□ -1.79
LDB3O75112 AC091390.1-201ENST00000433904 331 ntBASIC3.84□□□□□ -1.79
LDB3O75112 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.84□□□□□ -1.79
LDB3O75112 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.84□□□□□ -1.79
LDB3O75112 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.84□□□□□ -1.79
LDB3O75112 AL162388.1-201ENST00000450912 352 ntBASIC3.84□□□□□ -1.79
LDB3O75112 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms