Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 MTND5P28-201ENST00000438005 1594 ntBASIC3□□□□□ -1.93
SHOX2O60902 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
SHOX2O60902 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
SHOX2O60902 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3□□□□□ -1.93
SHOX2O60902 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
SHOX2O60902 RNVU1-14-201ENST00000384770 164 ntBASIC3□□□□□ -1.93
SHOX2O60902 MIR592-201ENST00000384959 97 ntBASIC3□□□□□ -1.93
SHOX2O60902 AL138880.1-201ENST00000405824 642 ntBASIC3□□□□□ -1.93
SHOX2O60902 U3.42-201ENST00000408746 214 ntBASIC3□□□□□ -1.93
SHOX2O60902 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3□□□□□ -1.93
SHOX2O60902 HSFY4P-201ENST00000415994 1181 ntBASIC3□□□□□ -1.93
SHOX2O60902 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3□□□□□ -1.93
SHOX2O60902 LAMTOR3P1-201ENST00000428620 370 ntBASIC3□□□□□ -1.93
SHOX2O60902 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3□□□□□ -1.93
SHOX2O60902 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3□□□□□ -1.93
SHOX2O60902 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3□□□□□ -1.93
SHOX2O60902 RPL21P23-201ENST00000446654 460 ntBASIC3□□□□□ -1.93
SHOX2O60902 ST13P20-201ENST00000447996 1065 ntBASIC3□□□□□ -1.93
SHOX2O60902 RPL7P52-201ENST00000449200 742 ntBASIC3□□□□□ -1.93
SHOX2O60902 RPL21P8-201ENST00000465083 535 ntBASIC3□□□□□ -1.93
SHOX2O60902 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3□□□□□ -1.93
SHOX2O60902 OR9N1P-202ENST00000494289 481 ntBASIC3□□□□□ -1.93
SHOX2O60902 AC021678.1-201ENST00000505195 936 ntBASIC3□□□□□ -1.93
SHOX2O60902 AC025881.1-201ENST00000518851 512 ntBASIC3□□□□□ -1.93
SHOX2O60902 TRAV11-201ENST00000539512 339 ntBASIC3□□□□□ -1.93
SHOX2O60902 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3□□□□□ -1.93
SHOX2O60902 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3□□□□□ -1.93
SHOX2O60902 MIR4474-201ENST00000579189 78 ntBASIC3□□□□□ -1.93
SHOX2O60902 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3□□□□□ -1.93
SHOX2O60902 YWHAQP7-201ENST00000603536 658 ntBASIC3□□□□□ -1.93
SHOX2O60902 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3□□□□□ -1.93
SHOX2O60902 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
SHOX2O60902 AC010297.1-201ENST00000623948 149 ntBASIC3□□□□□ -1.93
SHOX2O60902 AL136164.4-201ENST00000625013 2135 ntBASIC3□□□□□ -1.93
SHOX2O60902 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3□□□□□ -1.93
SHOX2O60902 AC046144.1-201ENST00000478559 1853 ntBASIC3□□□□□ -1.93
SHOX2O60902 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3□□□□□ -1.93
SHOX2O60902 ZNF33BP1-201ENST00000452497 1834 ntBASIC3□□□□□ -1.93
SHOX2O60902 ZNF90P1-201ENST00000480493 1951 ntBASIC3□□□□□ -1.93
SHOX2O60902 AC007342.9-201ENST00000623877 1385 ntBASIC3□□□□□ -1.93
SHOX2O60902 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SHOX2O60902 MTCO1P12-201ENST00000414273 1543 ntBASIC2.99□□□□□ -1.93
SHOX2O60902 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.99□□□□□ -1.93
SHOX2O60902 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SHOX2O60902 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SHOX2O60902 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SHOX2O60902 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SHOX2O60902 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SHOX2O60902 AL353692.2-201ENST00000407054 335 ntBASIC2.99□□□□□ -1.93
SHOX2O60902 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.99□□□□□ -1.93
SHOX2O60902 AL355994.1-201ENST00000424379 260 ntBASIC2.99□□□□□ -1.93
SHOX2O60902 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.99□□□□□ -1.93
SHOX2O60902 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.99□□□□□ -1.93
SHOX2O60902 RPL23AP20-201ENST00000447965 421 ntBASIC2.99□□□□□ -1.93
SHOX2O60902 ARPC3P2-201ENST00000457786 533 ntBASIC2.99□□□□□ -1.93
SHOX2O60902 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.99□□□□□ -1.93
SHOX2O60902 AC087190.1-201ENST00000484462 480 ntBASIC2.99□□□□□ -1.93
SHOX2O60902 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.99□□□□□ -1.93
SHOX2O60902 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.99□□□□□ -1.93
SHOX2O60902 AL442163.2-201ENST00000553912 710 ntBASIC2.99□□□□□ -1.93
SHOX2O60902 AL163153.1-201ENST00000554223 283 ntBASIC2.99□□□□□ -1.93
SHOX2O60902 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.99□□□□□ -1.93
SHOX2O60902 MIR4276-201ENST00000584832 70 ntBASIC2.99□□□□□ -1.93
SHOX2O60902 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.99□□□□□ -1.93
SHOX2O60902 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.99□□□□□ -1.93
SHOX2O60902 AC135507.2-201ENST00000612443 309 ntBASIC2.99□□□□□ -1.93
SHOX2O60902 AL355493.4-201ENST00000618530 292 ntBASIC2.99□□□□□ -1.93
SHOX2O60902 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SHOX2O60902 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.98□□□□□ -1.93
SHOX2O60902 RNA5SP126-201ENST00000365092 109 ntBASIC2.98□□□□□ -1.93
SHOX2O60902 SAR1AP2-201ENST00000392696 594 ntBASIC2.98□□□□□ -1.93
SHOX2O60902 RNU2-17P-201ENST00000410290 190 ntBASIC2.98□□□□□ -1.93
SHOX2O60902 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.98□□□□□ -1.93
SHOX2O60902 AC063979.1-201ENST00000415539 377 ntBASIC2.98□□□□□ -1.93
SHOX2O60902 RPS7P15-201ENST00000415804 584 ntBASIC2.98□□□□□ -1.93
SHOX2O60902 AL158156.1-201ENST00000422509 473 ntBASIC2.98□□□□□ -1.93
SHOX2O60902 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.98□□□□□ -1.93
SHOX2O60902 HMGN2P31-201ENST00000432430 273 ntBASIC2.98□□□□□ -1.93
SHOX2O60902 HMGN2P20-201ENST00000437531 273 ntBASIC2.98□□□□□ -1.93
SHOX2O60902 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.98□□□□□ -1.93
SHOX2O60902 ELOCP13-201ENST00000443934 329 ntBASIC2.98□□□□□ -1.93
SHOX2O60902 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.98□□□□□ -1.93
SHOX2O60902 MRPL50P4-201ENST00000446432 475 ntBASIC2.98□□□□□ -1.93
SHOX2O60902 PRDX3P4-201ENST00000470828 747 ntBASIC2.98□□□□□ -1.93
SHOX2O60902 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.98□□□□□ -1.93
SHOX2O60902 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SHOX2O60902 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.98□□□□□ -1.93
SHOX2O60902 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.98□□□□□ -1.93
SHOX2O60902 AC118465.1-201ENST00000513820 1271 ntBASIC2.98□□□□□ -1.93
SHOX2O60902 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.98□□□□□ -1.93
SHOX2O60902 C1DP5-201ENST00000525775 383 ntBASIC2.98□□□□□ -1.93
SHOX2O60902 AC139103.1-201ENST00000534696 1030 ntBASIC2.98□□□□□ -1.93
SHOX2O60902 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.98□□□□□ -1.93
SHOX2O60902 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.98□□□□□ -1.93
SHOX2O60902 AC012414.2-201ENST00000559474 187 ntBASIC2.98□□□□□ -1.93
SHOX2O60902 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.98□□□□□ -1.93
SHOX2O60902 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.98□□□□□ -1.93
SHOX2O60902 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.98□□□□□ -1.93
SHOX2O60902 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.98□□□□□ -1.93
SHOX2O60902 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms