Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.23□□□□□ -1.89
HCN1O60741 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.23□□□□□ -1.89
HCN1O60741 RPL23AP22-201ENST00000437556 453 ntBASIC3.23□□□□□ -1.89
HCN1O60741 AL357552.1-201ENST00000445254 415 ntBASIC3.23□□□□□ -1.89
HCN1O60741 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HCN1O60741 HMGN3P1-201ENST00000453847 193 ntBASIC3.23□□□□□ -1.89
HCN1O60741 NECAP1P2-201ENST00000455668 727 ntBASIC3.23□□□□□ -1.89
HCN1O60741 MTND2P39-201ENST00000457230 764 ntBASIC3.23□□□□□ -1.89
HCN1O60741 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.23□□□□□ -1.89
HCN1O60741 RN7SL594P-201ENST00000470590 287 ntBASIC3.23□□□□□ -1.89
HCN1O60741 RPL32P34-201ENST00000486380 400 ntBASIC3.23□□□□□ -1.89
HCN1O60741 MTND3P3-201ENST00000505004 126 ntBASIC3.23□□□□□ -1.89
HCN1O60741 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.23□□□□□ -1.89
HCN1O60741 SUMO2P5-201ENST00000506790 245 ntBASIC3.23□□□□□ -1.89
HCN1O60741 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HCN1O60741 AP000790.1-201ENST00000528891 737 ntBASIC3.23□□□□□ -1.89
HCN1O60741 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.23□□□□□ -1.89
HCN1O60741 AC092470.1-201ENST00000546187 132 ntBASIC3.23□□□□□ -1.89
HCN1O60741 AC074051.3-201ENST00000570238 358 ntBASIC3.23□□□□□ -1.89
HCN1O60741 MIR4666A-201ENST00000580160 79 ntBASIC3.23□□□□□ -1.89
HCN1O60741 AC005412.1-201ENST00000580812 1049 ntBASIC3.23□□□□□ -1.89
HCN1O60741 SNORD39.3-201ENST00000584451 71 ntBASIC3.23□□□□□ -1.89
HCN1O60741 AC008507.1-201ENST00000587506 734 ntBASIC3.23□□□□□ -1.89
HCN1O60741 AP001542.2-201ENST00000593141 364 ntBASIC3.23□□□□□ -1.89
HCN1O60741 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.23□□□□□ -1.89
HCN1O60741 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.23□□□□□ -1.89
HCN1O60741 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.23□□□□□ -1.89
HCN1O60741 SNORA50A-202ENST00000629536 136 ntBASIC3.23□□□□□ -1.89
HCN1O60741 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.23□□□□□ -1.89
HCN1O60741 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HCN1O60741 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HCN1O60741 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HCN1O60741 MFSD8-233ENST00000641482 4860 ntBASIC3.22□□□□□ -1.89
HCN1O60741 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HCN1O60741 AC118273.1-201ENST00000525324 3006 ntBASIC3.22□□□□□ -1.89
HCN1O60741 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HCN1O60741 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HCN1O60741 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HCN1O60741 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
HCN1O60741 MIR649-201ENST00000384843 97 ntBASIC3.22□□□□□ -1.89
HCN1O60741 AL355143.1-201ENST00000407101 841 ntBASIC3.22□□□□□ -1.89
HCN1O60741 RNA5SP107-201ENST00000411358 122 ntBASIC3.22□□□□□ -1.89
HCN1O60741 FCF1P2-201ENST00000415284 583 ntBASIC3.22□□□□□ -1.89
HCN1O60741 AC245291.1-201ENST00000419501 328 ntBASIC3.22□□□□□ -1.89
HCN1O60741 BX842559.1-201ENST00000419615 532 ntBASIC3.22□□□□□ -1.89
HCN1O60741 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.22□□□□□ -1.89
HCN1O60741 GTF2IP23-201ENST00000423746 351 ntBASIC3.22□□□□□ -1.89
HCN1O60741 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.22□□□□□ -1.89
HCN1O60741 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.22□□□□□ -1.89
HCN1O60741 AC096632.1-201ENST00000427395 310 ntBASIC3.22□□□□□ -1.89
HCN1O60741 B3GNT2P1-201ENST00000434960 952 ntBASIC3.22□□□□□ -1.89
HCN1O60741 RPL23AP83-201ENST00000434984 473 ntBASIC3.22□□□□□ -1.89
HCN1O60741 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.22□□□□□ -1.89
HCN1O60741 GAPDHP39-201ENST00000481866 979 ntBASIC3.22□□□□□ -1.89
HCN1O60741 AL024509.2-201ENST00000493462 493 ntBASIC3.22□□□□□ -1.89
HCN1O60741 SETP14-201ENST00000497538 873 ntBASIC3.22□□□□□ -1.89
HCN1O60741 RNF138P1-201ENST00000502765 546 ntBASIC3.22□□□□□ -1.89
HCN1O60741 AC008427.1-201ENST00000503102 655 ntBASIC3.22□□□□□ -1.89
HCN1O60741 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.22□□□□□ -1.89
HCN1O60741 FABP5P12-201ENST00000515543 389 ntBASIC3.22□□□□□ -1.89
HCN1O60741 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.22□□□□□ -1.89
HCN1O60741 RNA5SP135-201ENST00000517019 125 ntBASIC3.22□□□□□ -1.89
HCN1O60741 AC023632.1-201ENST00000518463 375 ntBASIC3.22□□□□□ -1.89
HCN1O60741 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.22□□□□□ -1.89
HCN1O60741 AC104417.1-201ENST00000523974 751 ntBASIC3.22□□□□□ -1.89
HCN1O60741 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.22□□□□□ -1.89
HCN1O60741 AC026333.2-201ENST00000542164 106 ntBASIC3.22□□□□□ -1.89
HCN1O60741 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.22□□□□□ -1.89
HCN1O60741 AC087897.1-201ENST00000550134 156 ntBASIC3.22□□□□□ -1.89
HCN1O60741 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.22□□□□□ -1.89
HCN1O60741 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.22□□□□□ -1.89
HCN1O60741 AC044913.1-201ENST00000557200 430 ntBASIC3.22□□□□□ -1.89
HCN1O60741 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.22□□□□□ -1.89
HCN1O60741 AC107954.1-201ENST00000565906 727 ntBASIC3.22□□□□□ -1.89
HCN1O60741 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.22□□□□□ -1.89
HCN1O60741 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.22□□□□□ -1.89
HCN1O60741 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.22□□□□□ -1.89
HCN1O60741 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.22□□□□□ -1.89
HCN1O60741 AC007179.3-201ENST00000604976 235 ntBASIC3.22□□□□□ -1.89
HCN1O60741 AL159169.3-201ENST00000608871 561 ntBASIC3.22□□□□□ -1.89
HCN1O60741 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HCN1O60741 AL355365.1-201ENST00000616480 294 ntBASIC3.22□□□□□ -1.89
HCN1O60741 AC110801.1-201ENST00000623590 212 ntBASIC3.22□□□□□ -1.89
HCN1O60741 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.22□□□□□ -1.89
HCN1O60741 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HCN1O60741 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
HCN1O60741 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.22□□□□□ -1.89
HCN1O60741 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
HCN1O60741 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.21□□□□□ -1.89
HCN1O60741 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HCN1O60741 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.21□□□□□ -1.9
HCN1O60741 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HCN1O60741 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HCN1O60741 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HCN1O60741 RNU6-50P-201ENST00000362356 103 ntBASIC3.21□□□□□ -1.9
HCN1O60741 RNU6-374P-201ENST00000364146 108 ntBASIC3.21□□□□□ -1.9
HCN1O60741 DEFB109C-201ENST00000382575 264 ntBASIC3.21□□□□□ -1.9
HCN1O60741 DEFB109B-201ENST00000382656 264 ntBASIC3.21□□□□□ -1.9
HCN1O60741 SNORA48.8-201ENST00000391324 134 ntBASIC3.21□□□□□ -1.9
HCN1O60741 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms