Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC007529.1-201ENST00000418574 2178 ntBASIC3.63□□□□□ -1.83
PRKNO60260 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
PRKNO60260 AC090229.1-201ENST00000590983 1609 ntBASIC3.63□□□□□ -1.83
PRKNO60260 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
PRKNO60260 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PRKNO60260 KPNA2P2-201ENST00000419546 1489 ntBASIC3.63□□□□□ -1.83
PRKNO60260 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PRKNO60260 Y_RNA.194-201ENST00000363985 102 ntBASIC3.63□□□□□ -1.83
PRKNO60260 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PRKNO60260 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PRKNO60260 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.63□□□□□ -1.83
PRKNO60260 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.63□□□□□ -1.83
PRKNO60260 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PRKNO60260 AL133412.1-201ENST00000380194 2992 ntBASIC3.63□□□□□ -1.83
PRKNO60260 MIR30B-201ENST00000384850 88 ntBASIC3.63□□□□□ -1.83
PRKNO60260 MIR1251-201ENST00000408552 70 ntBASIC3.63□□□□□ -1.83
PRKNO60260 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PRKNO60260 AC069218.2-201ENST00000411665 344 ntBASIC3.63□□□□□ -1.83
PRKNO60260 AL133384.1-201ENST00000412744 351 ntBASIC3.63□□□□□ -1.83
PRKNO60260 NUP35P2-201ENST00000416748 943 ntBASIC3.63□□□□□ -1.83
PRKNO60260 AL049610.1-201ENST00000423374 372 ntBASIC3.63□□□□□ -1.83
PRKNO60260 ZYG11AP1-201ENST00000430329 837 ntBASIC3.63□□□□□ -1.83
PRKNO60260 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.63□□□□□ -1.83
PRKNO60260 ELOCP18-201ENST00000434209 337 ntBASIC3.63□□□□□ -1.83
PRKNO60260 MTND4P6-201ENST00000438297 472 ntBASIC3.63□□□□□ -1.83
PRKNO60260 TRIM60P18-201ENST00000441518 828 ntBASIC3.63□□□□□ -1.83
PRKNO60260 CDC27P1-201ENST00000445384 715 ntBASIC3.63□□□□□ -1.83
PRKNO60260 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PRKNO60260 AL359073.1-201ENST00000448036 403 ntBASIC3.63□□□□□ -1.83
PRKNO60260 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.63□□□□□ -1.83
PRKNO60260 MEMO1P3-201ENST00000459811 302 ntBASIC3.63□□□□□ -1.83
PRKNO60260 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.63□□□□□ -1.83
PRKNO60260 RPS15AP17-201ENST00000470598 390 ntBASIC3.63□□□□□ -1.83
PRKNO60260 RN7SL271P-201ENST00000487601 295 ntBASIC3.63□□□□□ -1.83
PRKNO60260 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.63□□□□□ -1.83
PRKNO60260 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.63□□□□□ -1.83
PRKNO60260 AC006499.5-201ENST00000505037 514 ntBASIC3.63□□□□□ -1.83
PRKNO60260 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
PRKNO60260 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.63□□□□□ -1.83
PRKNO60260 AC090071.1-201ENST00000507713 644 ntBASIC3.63□□□□□ -1.83
PRKNO60260 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PRKNO60260 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.63□□□□□ -1.83
PRKNO60260 AC006499.2-201ENST00000513470 337 ntBASIC3.63□□□□□ -1.83
PRKNO60260 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.63□□□□□ -1.83
PRKNO60260 AC090281.1-201ENST00000523019 276 ntBASIC3.63□□□□□ -1.83
PRKNO60260 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.63□□□□□ -1.83
PRKNO60260 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.63□□□□□ -1.83
PRKNO60260 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.63□□□□□ -1.83
PRKNO60260 AL161713.1-201ENST00000555538 145 ntBASIC3.63□□□□□ -1.83
PRKNO60260 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.63□□□□□ -1.83
PRKNO60260 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.63□□□□□ -1.83
PRKNO60260 AC074050.1-201ENST00000563247 211 ntBASIC3.63□□□□□ -1.83
PRKNO60260 AC006362.1-201ENST00000567392 174 ntBASIC3.63□□□□□ -1.83
PRKNO60260 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.63□□□□□ -1.83
PRKNO60260 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.63□□□□□ -1.83
PRKNO60260 AC005255.1-201ENST00000593748 216 ntBASIC3.63□□□□□ -1.83
PRKNO60260 AC022146.1-201ENST00000595307 847 ntBASIC3.63□□□□□ -1.83
PRKNO60260 AL451086.1-201ENST00000605596 223 ntBASIC3.63□□□□□ -1.83
PRKNO60260 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.63□□□□□ -1.83
PRKNO60260 AC107214.2-201ENST00000608204 634 ntBASIC3.63□□□□□ -1.83
PRKNO60260 AC078899.5-201ENST00000612475 178 ntBASIC3.63□□□□□ -1.83
PRKNO60260 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.63□□□□□ -1.83
PRKNO60260 AC068722.2-201ENST00000618734 544 ntBASIC3.63□□□□□ -1.83
PRKNO60260 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.63□□□□□ -1.83
PRKNO60260 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.63□□□□□ -1.83
PRKNO60260 AL354798.1-201ENST00000622505 329 ntBASIC3.63□□□□□ -1.83
PRKNO60260 U6.101-201ENST00000637707 76 ntBASIC3.63□□□□□ -1.83
PRKNO60260 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PRKNO60260 MAPK10-253ENST00000641010 4072 ntBASIC3.63□□□□□ -1.83
PRKNO60260 MTND4P16-201ENST00000466108 1367 ntBASIC3.63□□□□□ -1.83
PRKNO60260 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.63□□□□□ -1.83
PRKNO60260 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
PRKNO60260 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRKNO60260 AP002907.1-201ENST00000606361 1430 ntBASIC3.62□□□□□ -1.83
PRKNO60260 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.62□□□□□ -1.83
PRKNO60260 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
PRKNO60260 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRKNO60260 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRKNO60260 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
PRKNO60260 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.62□□□□□ -1.83
PRKNO60260 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
PRKNO60260 AC018529.3-201ENST00000624212 2254 ntBASIC3.62□□□□□ -1.83
PRKNO60260 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRKNO60260 RNU6-1226P-201ENST00000384317 107 ntBASIC3.62□□□□□ -1.83
PRKNO60260 Y_RNA.553-201ENST00000384670 102 ntBASIC3.62□□□□□ -1.83
PRKNO60260 EIF5P1-201ENST00000400019 1231 ntBASIC3.62□□□□□ -1.83
PRKNO60260 AL355379.1-201ENST00000405542 640 ntBASIC3.62□□□□□ -1.83
PRKNO60260 AL138880.1-201ENST00000405824 642 ntBASIC3.62□□□□□ -1.83
PRKNO60260 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.62□□□□□ -1.83
PRKNO60260 RNU2-21P-201ENST00000410368 188 ntBASIC3.62□□□□□ -1.83
PRKNO60260 CYCSP19-201ENST00000411715 316 ntBASIC3.62□□□□□ -1.83
PRKNO60260 RPL7AP73-201ENST00000413490 353 ntBASIC3.62□□□□□ -1.83
PRKNO60260 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.62□□□□□ -1.83
PRKNO60260 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.62□□□□□ -1.83
PRKNO60260 AC083875.1-201ENST00000419509 405 ntBASIC3.62□□□□□ -1.83
PRKNO60260 RPL7P30-201ENST00000420888 709 ntBASIC3.62□□□□□ -1.83
PRKNO60260 EIF4EP1-201ENST00000422311 642 ntBASIC3.62□□□□□ -1.83
PRKNO60260 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PRKNO60260 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.62□□□□□ -1.83
PRKNO60260 Z74696.2-201ENST00000436514 498 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms