Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.69□□□□□ -1.82
SSX4O60224 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.69□□□□□ -1.82
SSX4O60224 AC010625.1-201ENST00000511296 403 ntBASIC3.69□□□□□ -1.82
SSX4O60224 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.69□□□□□ -1.82
SSX4O60224 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.69□□□□□ -1.82
SSX4O60224 IGKV2D-23-201ENST00000518179 286 ntBASIC3.69□□□□□ -1.82
SSX4O60224 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.69□□□□□ -1.82
SSX4O60224 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.69□□□□□ -1.82
SSX4O60224 EEF1B2P4-201ENST00000551398 348 ntBASIC3.69□□□□□ -1.82
SSX4O60224 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
SSX4O60224 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.69□□□□□ -1.82
SSX4O60224 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.69□□□□□ -1.82
SSX4O60224 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.69□□□□□ -1.82
SSX4O60224 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.69□□□□□ -1.82
SSX4O60224 AC068313.1-201ENST00000604028 1008 ntBASIC3.69□□□□□ -1.82
SSX4O60224 RNU6-88P-201ENST00000606801 100 ntBASIC3.69□□□□□ -1.82
SSX4O60224 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SSX4O60224 AL031667.3-201ENST00000620124 655 ntBASIC3.69□□□□□ -1.82
SSX4O60224 MIR8059-201ENST00000620427 81 ntBASIC3.69□□□□□ -1.82
SSX4O60224 AL356596.1-201ENST00000624230 379 ntBASIC3.69□□□□□ -1.82
SSX4O60224 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
SSX4O60224 AC106871.1-201ENST00000568324 3102 ntBASIC3.69□□□□□ -1.82
SSX4O60224 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.69□□□□□ -1.82
SSX4O60224 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SSX4O60224 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.69□□□□□ -1.82
SSX4O60224 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.69□□□□□ -1.82
SSX4O60224 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.68□□□□□ -1.82
SSX4O60224 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSX4O60224 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.68□□□□□ -1.82
SSX4O60224 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSX4O60224 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SSX4O60224 Y_RNA.18-201ENST00000362461 102 ntBASIC3.68□□□□□ -1.82
SSX4O60224 RNU6-462P-201ENST00000362659 105 ntBASIC3.68□□□□□ -1.82
SSX4O60224 AL359837.1-201ENST00000381357 287 ntBASIC3.68□□□□□ -1.82
SSX4O60224 RNY3P9-201ENST00000384727 106 ntBASIC3.68□□□□□ -1.82
SSX4O60224 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SSX4O60224 RNU6-837P-201ENST00000391056 108 ntBASIC3.68□□□□□ -1.82
SSX4O60224 AL583834.1-201ENST00000406943 343 ntBASIC3.68□□□□□ -1.82
SSX4O60224 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.68□□□□□ -1.82
SSX4O60224 AC083875.1-201ENST00000419509 405 ntBASIC3.68□□□□□ -1.82
SSX4O60224 AL139095.3-201ENST00000419672 1203 ntBASIC3.68□□□□□ -1.82
SSX4O60224 MTND2P18-201ENST00000419962 1030 ntBASIC3.68□□□□□ -1.82
SSX4O60224 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.68□□□□□ -1.82
SSX4O60224 USP9YP26-201ENST00000421008 661 ntBASIC3.68□□□□□ -1.82
SSX4O60224 AC244098.2-201ENST00000422068 99 ntBASIC3.68□□□□□ -1.82
SSX4O60224 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SSX4O60224 MTCO2P5-201ENST00000422621 426 ntBASIC3.68□□□□□ -1.82
SSX4O60224 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.68□□□□□ -1.82
SSX4O60224 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.68□□□□□ -1.82
SSX4O60224 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.68□□□□□ -1.82
SSX4O60224 AL117351.1-201ENST00000438864 766 ntBASIC3.68□□□□□ -1.82
SSX4O60224 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.68□□□□□ -1.82
SSX4O60224 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.68□□□□□ -1.82
SSX4O60224 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.68□□□□□ -1.82
SSX4O60224 AP001992.1-205ENST00000462248 379 ntBASIC3.68□□□□□ -1.82
SSX4O60224 AC091153.1-201ENST00000466297 402 ntBASIC3.68□□□□□ -1.82
SSX4O60224 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
SSX4O60224 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.68□□□□□ -1.82
SSX4O60224 RPL21P129-201ENST00000491732 478 ntBASIC3.68□□□□□ -1.82
SSX4O60224 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.68□□□□□ -1.82
SSX4O60224 AC008958.1-201ENST00000511047 682 ntBASIC3.68□□□□□ -1.82
SSX4O60224 SNORA70.14-201ENST00000516205 110 ntBASIC3.68□□□□□ -1.82
SSX4O60224 IGKV2-38-201ENST00000517443 247 ntBASIC3.68□□□□□ -1.82
SSX4O60224 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.68□□□□□ -1.82
SSX4O60224 MED28P5-201ENST00000528254 438 ntBASIC3.68□□□□□ -1.82
SSX4O60224 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.68□□□□□ -1.82
SSX4O60224 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSX4O60224 AC007834.2-201ENST00000536310 343 ntBASIC3.68□□□□□ -1.82
SSX4O60224 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.68□□□□□ -1.82
SSX4O60224 OSBPL9P5-201ENST00000542581 171 ntBASIC3.68□□□□□ -1.82
SSX4O60224 AC034105.4-201ENST00000568304 277 ntBASIC3.68□□□□□ -1.82
SSX4O60224 AC053481.3-201ENST00000577881 843 ntBASIC3.68□□□□□ -1.82
SSX4O60224 AC090616.5-202ENST00000582111 297 ntBASIC3.68□□□□□ -1.82
SSX4O60224 AC090616.2-202ENST00000584248 222 ntBASIC3.68□□□□□ -1.82
SSX4O60224 BNIP3P33-201ENST00000598912 569 ntBASIC3.68□□□□□ -1.82
SSX4O60224 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.68□□□□□ -1.82
SSX4O60224 AL390208.1-201ENST00000605885 644 ntBASIC3.68□□□□□ -1.82
SSX4O60224 AC128687.2-201ENST00000609657 566 ntBASIC3.68□□□□□ -1.82
SSX4O60224 VIS1.1-201ENST00000610517 203 ntBASIC3.68□□□□□ -1.82
SSX4O60224 AL392048.1-201ENST00000613946 534 ntBASIC3.68□□□□□ -1.82
SSX4O60224 AC007546.1-201ENST00000619452 559 ntBASIC3.68□□□□□ -1.82
SSX4O60224 AC079248.2-201ENST00000623779 326 ntBASIC3.68□□□□□ -1.82
SSX4O60224 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.68□□□□□ -1.82
SSX4O60224 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSX4O60224 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSX4O60224 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.68□□□□□ -1.82
SSX4O60224 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSX4O60224 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSX4O60224 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.68□□□□□ -1.82
SSX4O60224 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SSX4O60224 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SSX4O60224 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSX4O60224 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SSX4O60224 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SSX4O60224 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSX4O60224 RNA5SP258-201ENST00000362750 119 ntBASIC3.67□□□□□ -1.82
SSX4O60224 RNU6-433P-201ENST00000363216 104 ntBASIC3.67□□□□□ -1.82
SSX4O60224 RNU6-777P-201ENST00000364265 104 ntBASIC3.67□□□□□ -1.82
SSX4O60224 RNA5SP175-201ENST00000364275 119 ntBASIC3.67□□□□□ -1.82
SSX4O60224 RNU6-343P-201ENST00000364709 104 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms