Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PRPF3O43395 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.82□□□□□ -1.64
PRPF3O43395 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.81□□□□□ -1.64
PRPF3O43395 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PRPF3O43395 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PRPF3O43395 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.81□□□□□ -1.64
PRPF3O43395 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PRPF3O43395 MTND4P16-201ENST00000466108 1367 ntBASIC4.81□□□□□ -1.64
PRPF3O43395 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
PRPF3O43395 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
PRPF3O43395 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PRPF3O43395 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PRPF3O43395 AL121657.1-201ENST00000327215 531 ntBASIC4.81□□□□□ -1.64
PRPF3O43395 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PRPF3O43395 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PRPF3O43395 AL356967.1-201ENST00000406305 431 ntBASIC4.81□□□□□ -1.64
PRPF3O43395 EI24P1-201ENST00000416584 867 ntBASIC4.81□□□□□ -1.64
PRPF3O43395 AC099677.1-201ENST00000420575 175 ntBASIC4.81□□□□□ -1.64
PRPF3O43395 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.81□□□□□ -1.64
PRPF3O43395 MTCO3P5-201ENST00000433620 714 ntBASIC4.81□□□□□ -1.64
PRPF3O43395 RSU1P2-202ENST00000437884 485 ntBASIC4.81□□□□□ -1.64
PRPF3O43395 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.81□□□□□ -1.64
PRPF3O43395 AL117351.1-201ENST00000438864 766 ntBASIC4.81□□□□□ -1.64
PRPF3O43395 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.81□□□□□ -1.64
PRPF3O43395 RPS23P7-201ENST00000466210 444 ntBASIC4.81□□□□□ -1.64
PRPF3O43395 AC023424.2-201ENST00000493479 777 ntBASIC4.81□□□□□ -1.64
PRPF3O43395 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.81□□□□□ -1.64
PRPF3O43395 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.81□□□□□ -1.64
PRPF3O43395 AP000873.5-201ENST00000533906 236 ntBASIC4.81□□□□□ -1.64
PRPF3O43395 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.81□□□□□ -1.64
PRPF3O43395 SNORD84-203ENST00000584275 78 ntBASIC4.81□□□□□ -1.64
PRPF3O43395 TPMTP1-201ENST00000592307 737 ntBASIC4.81□□□□□ -1.64
PRPF3O43395 AL451044.1-201ENST00000604867 238 ntBASIC4.81□□□□□ -1.64
PRPF3O43395 AC004853.1-201ENST00000604902 698 ntBASIC4.81□□□□□ -1.64
PRPF3O43395 ARF4P1-201ENST00000605447 541 ntBASIC4.81□□□□□ -1.64
PRPF3O43395 AL031775.1-201ENST00000607014 887 ntBASIC4.81□□□□□ -1.64
PRPF3O43395 AC079597.1-201ENST00000624306 508 ntBASIC4.81□□□□□ -1.64
PRPF3O43395 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.81□□□□□ -1.64
PRPF3O43395 AL049780.3-201ENST00000624612 1583 ntBASIC4.81□□□□□ -1.64
PRPF3O43395 AL365440.1-201ENST00000436135 2167 ntBASIC4.81□□□□□ -1.64
PRPF3O43395 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.81□□□□□ -1.64
PRPF3O43395 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.8□□□□□ -1.64
PRPF3O43395 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PRPF3O43395 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PRPF3O43395 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PRPF3O43395 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.8□□□□□ -1.64
PRPF3O43395 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PRPF3O43395 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
PRPF3O43395 MIR448-201ENST00000362131 111 ntBASIC4.8□□□□□ -1.64
PRPF3O43395 RNU6-97P-201ENST00000363387 104 ntBASIC4.8□□□□□ -1.64
PRPF3O43395 Y_RNA.234-201ENST00000364409 97 ntBASIC4.8□□□□□ -1.64
PRPF3O43395 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.8□□□□□ -1.64
PRPF3O43395 RNU6-769P-201ENST00000384407 104 ntBASIC4.8□□□□□ -1.64
PRPF3O43395 AL049693.1-201ENST00000402760 611 ntBASIC4.8□□□□□ -1.64
PRPF3O43395 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.8□□□□□ -1.64
PRPF3O43395 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.8□□□□□ -1.64
PRPF3O43395 AC109780.2-201ENST00000413467 845 ntBASIC4.8□□□□□ -1.64
PRPF3O43395 AC245052.5-201ENST00000416320 649 ntBASIC4.8□□□□□ -1.64
PRPF3O43395 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.8□□□□□ -1.64
PRPF3O43395 RPL23AP38-201ENST00000423801 469 ntBASIC4.8□□□□□ -1.64
PRPF3O43395 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.8□□□□□ -1.64
PRPF3O43395 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.8□□□□□ -1.64
PRPF3O43395 MTCO2P16-201ENST00000436962 677 ntBASIC4.8□□□□□ -1.64
PRPF3O43395 UBE2V1P13-201ENST00000436983 439 ntBASIC4.8□□□□□ -1.64
PRPF3O43395 THAP5P1-201ENST00000439089 262 ntBASIC4.8□□□□□ -1.64
PRPF3O43395 AC006011.1-201ENST00000442758 349 ntBASIC4.8□□□□□ -1.64
PRPF3O43395 AL121871.1-201ENST00000443413 436 ntBASIC4.8□□□□□ -1.64
PRPF3O43395 AP000542.1-201ENST00000448473 371 ntBASIC4.8□□□□□ -1.64
PRPF3O43395 TPT1P12-201ENST00000448968 492 ntBASIC4.8□□□□□ -1.64
PRPF3O43395 AL645939.1-201ENST00000453429 797 ntBASIC4.8□□□□□ -1.64
PRPF3O43395 AP1S2P1-201ENST00000457344 379 ntBASIC4.8□□□□□ -1.64
PRPF3O43395 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.8□□□□□ -1.64
PRPF3O43395 S100A11P1-201ENST00000477525 312 ntBASIC4.8□□□□□ -1.64
PRPF3O43395 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.8□□□□□ -1.64
PRPF3O43395 Y_RNA.695-201ENST00000516715 107 ntBASIC4.8□□□□□ -1.64
PRPF3O43395 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PRPF3O43395 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.8□□□□□ -1.64
PRPF3O43395 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.8□□□□□ -1.64
PRPF3O43395 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PRPF3O43395 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.8□□□□□ -1.64
PRPF3O43395 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.8□□□□□ -1.64
PRPF3O43395 MIR4307-201ENST00000582802 84 ntBASIC4.8□□□□□ -1.64
PRPF3O43395 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.8□□□□□ -1.64
PRPF3O43395 AP005264.7-201ENST00000625003 745 ntBASIC4.8□□□□□ -1.64
PRPF3O43395 AC093591.3-201ENST00000634516 308 ntBASIC4.8□□□□□ -1.64
PRPF3O43395 MIR6830-201ENST00000636015 70 ntBASIC4.8□□□□□ -1.64
PRPF3O43395 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PRPF3O43395 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PRPF3O43395 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
PRPF3O43395 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.8□□□□□ -1.64
PRPF3O43395 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PRPF3O43395 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF3O43395 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF3O43395 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.79□□□□□ -1.64
PRPF3O43395 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF3O43395 AC116096.1-201ENST00000566804 2314 ntBASIC4.79□□□□□ -1.64
PRPF3O43395 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
PRPF3O43395 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF3O43395 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF3O43395 RNU6-989P-201ENST00000362756 107 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms