Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 UBE2L2-201ENST00000254302 429 ntBASIC9.83□□□□□ -0.84
MSH5O43196 RNU6-324P-201ENST00000363957 106 ntBASIC9.83□□□□□ -0.84
MSH5O43196 SNORA79-201ENST00000408376 140 ntBASIC9.83□□□□□ -0.84
MSH5O43196 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC9.83□□□□□ -0.84
MSH5O43196 AL138899.2-201ENST00000439139 499 ntBASIC9.83□□□□□ -0.84
MSH5O43196 AL162739.1-201ENST00000450606 307 ntBASIC9.83□□□□□ -0.84
MSH5O43196 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC9.83□□□□□ -0.84
MSH5O43196 AC009153.1-201ENST00000485799 496 ntBASIC9.83□□□□□ -0.84
MSH5O43196 RNU6-344P-201ENST00000516635 111 ntBASIC9.83□□□□□ -0.84
MSH5O43196 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC9.83□□□□□ -0.84
MSH5O43196 AC018448.1-201ENST00000552843 316 ntBASIC9.83□□□□□ -0.84
MSH5O43196 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC9.83□□□□□ -0.84
MSH5O43196 AC006335.3-201ENST00000613408 292 ntBASIC9.83□□□□□ -0.84
MSH5O43196 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
MSH5O43196 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
MSH5O43196 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
MSH5O43196 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC9.83□□□□□ -0.84
MSH5O43196 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
MSH5O43196 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
MSH5O43196 SPATA31C1-201ENST00000420021 3895 ntBASIC9.82□□□□□ -0.84
MSH5O43196 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
MSH5O43196 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
MSH5O43196 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
MSH5O43196 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC9.82□□□□□ -0.84
MSH5O43196 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
MSH5O43196 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
MSH5O43196 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
MSH5O43196 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC9.82□□□□□ -0.84
MSH5O43196 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC9.82□□□□□ -0.84
MSH5O43196 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
MSH5O43196 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
MSH5O43196 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
MSH5O43196 AL133482.1-201ENST00000415988 498 ntBASIC9.82□□□□□ -0.84
MSH5O43196 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC9.82□□□□□ -0.84
MSH5O43196 CYP4F34P-201ENST00000425951 481 ntBASIC9.82□□□□□ -0.84
MSH5O43196 CALM2P4-201ENST00000430810 426 ntBASIC9.82□□□□□ -0.84
MSH5O43196 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC9.82□□□□□ -0.84
MSH5O43196 LIN28AP2-201ENST00000445283 458 ntBASIC9.82□□□□□ -0.84
MSH5O43196 KF459542.1-201ENST00000450908 553 ntBASIC9.82□□□□□ -0.84
MSH5O43196 AC053481.1-201ENST00000467217 306 ntBASIC9.82□□□□□ -0.84
MSH5O43196 SNORD39.2-201ENST00000579995 76 ntBASIC9.82□□□□□ -0.84
MSH5O43196 IGLJCOR18-201ENST00000584002 424 ntBASIC9.82□□□□□ -0.84
MSH5O43196 AC093535.2-201ENST00000624769 2326 ntBASIC9.82□□□□□ -0.84
MSH5O43196 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
MSH5O43196 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC9.81□□□□□ -0.84
MSH5O43196 LPAL2-203ENST00000454031 2498 ntBASIC9.81□□□□□ -0.84
MSH5O43196 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
MSH5O43196 AC027228.2-201ENST00000567141 2154 ntBASIC9.81□□□□□ -0.84
MSH5O43196 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
MSH5O43196 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
MSH5O43196 RNU6-1205P-201ENST00000363625 106 ntBASIC9.81□□□□□ -0.84
MSH5O43196 RNA5SP260-201ENST00000363849 111 ntBASIC9.81□□□□□ -0.84
MSH5O43196 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
MSH5O43196 RNA5SP177-201ENST00000410122 107 ntBASIC9.81□□□□□ -0.84
MSH5O43196 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
MSH5O43196 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
MSH5O43196 AC114801.3-201ENST00000510231 177 ntBASIC9.81□□□□□ -0.84
MSH5O43196 AC091932.1-201ENST00000569381 427 ntBASIC9.81□□□□□ -0.84
MSH5O43196 RN7SL66P-201ENST00000582099 264 ntBASIC9.81□□□□□ -0.84
MSH5O43196 AC061975.3-201ENST00000583209 244 ntBASIC9.81□□□□□ -0.84
MSH5O43196 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC9.81□□□□□ -0.84
MSH5O43196 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC9.81□□□□□ -0.84
MSH5O43196 AC004852.1-201ENST00000605206 154 ntBASIC9.81□□□□□ -0.84
MSH5O43196 RN7SL778P-201ENST00000607160 297 ntBASIC9.81□□□□□ -0.84
MSH5O43196 AL355480.1-201ENST00000629041 99 ntBASIC9.81□□□□□ -0.84
MSH5O43196 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC9.81□□□□□ -0.84
MSH5O43196 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
MSH5O43196 AC011933.2-201ENST00000578539 2790 ntBASIC9.81□□□□□ -0.84
MSH5O43196 CR1-203ENST00000367051 7469 ntTSL 5 BASIC9.81□□□□□ -0.84
MSH5O43196 CR1-204ENST00000367052 7469 ntTSL 5 BASIC9.81□□□□□ -0.84
MSH5O43196 CR1-205ENST00000367053 7469 ntTSL 5 BASIC9.81□□□□□ -0.84
MSH5O43196 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
MSH5O43196 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
MSH5O43196 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
MSH5O43196 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
MSH5O43196 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC9.81□□□□□ -0.84
MSH5O43196 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
MSH5O43196 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC9.81□□□□□ -0.84
MSH5O43196 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
MSH5O43196 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
MSH5O43196 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
MSH5O43196 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC9.8□□□□□ -0.84
MSH5O43196 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
MSH5O43196 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
MSH5O43196 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
MSH5O43196 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
MSH5O43196 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
MSH5O43196 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
MSH5O43196 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
MSH5O43196 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
MSH5O43196 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC9.8□□□□□ -0.84
MSH5O43196 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
MSH5O43196 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
MSH5O43196 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
MSH5O43196 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
MSH5O43196 OR52B5P-204ENST00000641744 3467 ntBASIC9.8□□□□□ -0.84
MSH5O43196 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
MSH5O43196 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
MSH5O43196 RNU2-22P-201ENST00000411266 212 ntBASIC9.8□□□□□ -0.84
MSH5O43196 AC069218.2-201ENST00000411665 344 ntBASIC9.8□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 213.6 ms