Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.46□□□□□ -2.01
CACNA1AO00555 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.46□□□□□ -2.01
CACNA1AO00555 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.46□□□□□ -2.01
CACNA1AO00555 NANOGP5-201ENST00000424456 877 ntBASIC2.46□□□□□ -2.01
CACNA1AO00555 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.46□□□□□ -2.01
CACNA1AO00555 TOMM22P6-201ENST00000465035 409 ntBASIC2.46□□□□□ -2.01
CACNA1AO00555 FAM92A1P2-202ENST00000504766 877 ntBASIC2.46□□□□□ -2.01
CACNA1AO00555 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
CACNA1AO00555 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC2.46□□□□□ -2.01
CACNA1AO00555 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.46□□□□□ -2.01
CACNA1AO00555 MTND4LP5-201ENST00000605152 292 ntBASIC2.46□□□□□ -2.01
CACNA1AO00555 CR381670.1-201ENST00000624291 1693 ntBASIC2.46□□□□□ -2.02
CACNA1AO00555 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CACNA1AO00555 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CACNA1AO00555 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CACNA1AO00555 RNU4-62P-201ENST00000410125 130 ntBASIC2.46□□□□□ -2.02
CACNA1AO00555 AC002075.2-201ENST00000425207 252 ntBASIC2.46□□□□□ -2.02
CACNA1AO00555 USP12PY-201ENST00000427677 1064 ntBASIC2.46□□□□□ -2.02
CACNA1AO00555 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC2.46□□□□□ -2.02
CACNA1AO00555 AC013410.1-201ENST00000436223 1232 ntBASIC2.46□□□□□ -2.02
CACNA1AO00555 HSPE1P28-201ENST00000443139 211 ntBASIC2.46□□□□□ -2.02
CACNA1AO00555 AC099560.2-201ENST00000457554 255 ntBASIC2.46□□□□□ -2.02
CACNA1AO00555 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.46□□□□□ -2.02
CACNA1AO00555 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.46□□□□□ -2.02
CACNA1AO00555 ARL2BPP2-201ENST00000550907 489 ntBASIC2.46□□□□□ -2.02
CACNA1AO00555 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CACNA1AO00555 MIR4723-201ENST00000585070 81 ntBASIC2.46□□□□□ -2.02
CACNA1AO00555 AC096772.1-201ENST00000609146 564 ntBASIC2.46□□□□□ -2.02
CACNA1AO00555 MIR6873-201ENST00000622788 63 ntBASIC2.46□□□□□ -2.02
CACNA1AO00555 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
CACNA1AO00555 NCAPGP1-201ENST00000505112 1814 ntBASIC2.46□□□□□ -2.02
CACNA1AO00555 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
CACNA1AO00555 DDX18P3-201ENST00000404856 2007 ntBASIC2.46□□□□□ -2.02
CACNA1AO00555 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CACNA1AO00555 AL450263.2-201ENST00000439400 589 ntBASIC2.45□□□□□ -2.02
CACNA1AO00555 AC072039.1-201ENST00000477611 581 ntBASIC2.45□□□□□ -2.02
CACNA1AO00555 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC2.45□□□□□ -2.02
CACNA1AO00555 AC103810.8-201ENST00000607347 118 ntBASIC2.45□□□□□ -2.02
CACNA1AO00555 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
CACNA1AO00555 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
CACNA1AO00555 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
CACNA1AO00555 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.45□□□□□ -2.02
CACNA1AO00555 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.45□□□□□ -2.02
CACNA1AO00555 RPL31P2-201ENST00000413849 377 ntBASIC2.45□□□□□ -2.02
CACNA1AO00555 RPLP0P7-201ENST00000416050 667 ntBASIC2.45□□□□□ -2.02
CACNA1AO00555 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.45□□□□□ -2.02
CACNA1AO00555 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.45□□□□□ -2.02
CACNA1AO00555 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.45□□□□□ -2.02
CACNA1AO00555 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
CACNA1AO00555 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.45□□□□□ -2.02
CACNA1AO00555 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CACNA1AO00555 AC110588.1-201ENST00000559699 137 ntBASIC2.45□□□□□ -2.02
CACNA1AO00555 MIR6845-201ENST00000613182 61 ntBASIC2.45□□□□□ -2.02
CACNA1AO00555 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.45□□□□□ -2.02
CACNA1AO00555 RNA5SP88-201ENST00000365560 109 ntBASIC2.44□□□□□ -2.02
CACNA1AO00555 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CACNA1AO00555 AC007064.1-201ENST00000412238 351 ntBASIC2.44□□□□□ -2.02
CACNA1AO00555 AC005534.2-201ENST00000431047 433 ntBASIC2.44□□□□□ -2.02
CACNA1AO00555 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.44□□□□□ -2.02
CACNA1AO00555 AC003982.1-202ENST00000469928 248 ntBASIC2.44□□□□□ -2.02
CACNA1AO00555 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.44□□□□□ -2.02
CACNA1AO00555 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
CACNA1AO00555 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CACNA1AO00555 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CACNA1AO00555 MTND5P24-201ENST00000438892 1767 ntBASIC2.44□□□□□ -2.02
CACNA1AO00555 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CACNA1AO00555 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CACNA1AO00555 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC2.44□□□□□ -2.02
CACNA1AO00555 MTND4P10-201ENST00000446199 1363 ntBASIC2.44□□□□□ -2.02
CACNA1AO00555 RNA5SP457-201ENST00000363657 124 ntBASIC2.44□□□□□ -2.02
CACNA1AO00555 RPL23AP58-201ENST00000440453 469 ntBASIC2.44□□□□□ -2.02
CACNA1AO00555 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.44□□□□□ -2.02
CACNA1AO00555 snoU109.4-201ENST00000458953 143 ntBASIC2.44□□□□□ -2.02
CACNA1AO00555 AC093663.2-201ENST00000484625 313 ntBASIC2.44□□□□□ -2.02
CACNA1AO00555 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.44□□□□□ -2.02
CACNA1AO00555 DNAJC8P1-201ENST00000554535 372 ntBASIC2.44□□□□□ -2.02
CACNA1AO00555 RPS3AP4-201ENST00000555161 764 ntBASIC2.44□□□□□ -2.02
CACNA1AO00555 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.44□□□□□ -2.02
CACNA1AO00555 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.44□□□□□ -2.02
CACNA1AO00555 AL024474.1-201ENST00000404655 591 ntBASIC2.43□□□□□ -2.02
CACNA1AO00555 ATP5F1P1-201ENST00000433775 569 ntBASIC2.43□□□□□ -2.02
CACNA1AO00555 AC112220.1-201ENST00000434628 355 ntBASIC2.43□□□□□ -2.02
CACNA1AO00555 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.43□□□□□ -2.02
CACNA1AO00555 MTCO3P11-201ENST00000455103 774 ntBASIC2.43□□□□□ -2.02
CACNA1AO00555 SNRPFP4-201ENST00000456366 242 ntBASIC2.43□□□□□ -2.02
CACNA1AO00555 RPL21P6-201ENST00000479171 504 ntBASIC2.43□□□□□ -2.02
CACNA1AO00555 RAD21-204ENST00000518055 896 ntTSL 2 BASIC2.43□□□□□ -2.02
CACNA1AO00555 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.43□□□□□ -2.02
CACNA1AO00555 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.43□□□□□ -2.02
CACNA1AO00555 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC2.43□□□□□ -2.02
CACNA1AO00555 AL136164.4-201ENST00000625013 2135 ntBASIC2.43□□□□□ -2.02
CACNA1AO00555 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CACNA1AO00555 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CACNA1AO00555 RNU1-57P-201ENST00000384491 166 ntBASIC2.43□□□□□ -2.02
CACNA1AO00555 MIR583-201ENST00000384846 75 ntBASIC2.43□□□□□ -2.02
CACNA1AO00555 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.43□□□□□ -2.02
CACNA1AO00555 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC2.43□□□□□ -2.02
CACNA1AO00555 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC2.43□□□□□ -2.02
CACNA1AO00555 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.43□□□□□ -2.02
CACNA1AO00555 AC034244.2-201ENST00000514668 858 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms