Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 RNU1-103P-201ENST00000516502 125 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 TRMT10BP1-201ENST00000519377 943 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AC092325.1-201ENST00000566449 554 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AL669831.4-202ENST00000590817 238 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AC010680.4-201ENST00000605334 543 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AC090970.3-201ENST00000612566 866 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AL049794.2-201ENST00000616301 365 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 MIR6863-201ENST00000636112 90 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
CCDC85CA6NKD9 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCDC85CA6NKD9 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CCDC85CA6NKD9 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.34□□□□□ -1.56
CCDC85CA6NKD9 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
CCDC85CA6NKD9 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
CCDC85CA6NKD9 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 RN7SKP153-201ENST00000365026 316 ntBASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 BTF3P7-201ENST00000407097 488 ntBASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 RN7SKP267-201ENST00000410381 285 ntBASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 AC140479.3-201ENST00000418944 1126 ntBASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 AC114495.1-201ENST00000441274 436 ntBASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 AL590399.6-201ENST00000446396 307 ntBASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 AC132479.1-201ENST00000449160 144 ntBASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 MTCO3P20-201ENST00000454926 688 ntBASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 snoU13.3-201ENST00000459441 104 ntBASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 RPL21P103-201ENST00000479921 488 ntBASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 VN1R105P-201ENST00000486595 910 ntBASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 AC108475.1-201ENST00000507880 950 ntBASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 Vault.3-201ENST00000516676 95 ntBASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 AC107934.1-201ENST00000522215 217 ntBASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 OR8Q1P-201ENST00000526467 655 ntBASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 AC019322.1-201ENST00000571869 389 ntBASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 AC112230.1-201ENST00000604342 547 ntBASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 uc_338.7-201ENST00000621834 124 ntBASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 AL732618.1-201ENST00000623251 301 ntBASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 AC040168.1-201ENST00000623594 991 ntBASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 OR14L1P-202ENST00000641545 3009 ntBASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 ZNF137P-201ENST00000456718 1920 ntBASIC5.33□□□□□ -1.56
CCDC85CA6NKD9 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 AC024560.2-201ENST00000507981 1497 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 Y_RNA.9-201ENST00000362354 101 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 RNU6-989P-201ENST00000362756 107 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 SNORA70.9-201ENST00000384370 135 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 MIR34B-201ENST00000385076 84 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 MIR589-201ENST00000385238 99 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms