Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RPS20P14-201ENST00000412545 360 ntBASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AL356583.2-201ENST00000426536 280 ntBASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 RPS27AP12-201ENST00000429552 465 ntBASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 Z99127.3-201ENST00000448158 395 ntBASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 MTND2P24-201ENST00000453434 806 ntBASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AL591473.1-201ENST00000464297 313 ntBASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 FAM92A1P2-202ENST00000504766 877 ntBASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 MIR2116-201ENST00000517221 80 ntBASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 MRPL49P2-201ENST00000521066 465 ntBASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AC008562.1-201ENST00000521763 330 ntBASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AC137800.2-201ENST00000574375 120 ntBASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 BNIP3P33-201ENST00000598912 569 ntBASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 BPIFA4P-203ENST00000603168 689 ntBASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AC103792.1-201ENST00000603591 919 ntBASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 PRELID3BP8-201ENST00000604148 295 ntBASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AC090578.1-201ENST00000604955 591 ntBASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 COX6CP4-201ENST00000605798 228 ntBASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AC103710.4-201ENST00000609301 899 ntBASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AL158209.2-201ENST00000619266 216 ntBASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AC104985.2-201ENST00000620598 500 ntBASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AC139769.1-204ENST00000472297 1931 ntBASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.14□□□□□ -1.59
CTDP1Q9Y5B0 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 MIR331-201ENST00000362302 94 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 RN7SKP44-201ENST00000363602 316 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AL078604.1-201ENST00000404609 466 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 CIR1P3-201ENST00000405137 479 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 MIR1277-201ENST00000408536 78 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 Y_RNA.598-201ENST00000410480 95 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 USP9YP6-201ENST00000413550 854 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AL109913.1-201ENST00000421173 514 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 RPL37P21-201ENST00000435890 276 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AL662791.1-201ENST00000441992 928 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AC004865.1-201ENST00000442276 1003 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AC112653.1-201ENST00000443851 386 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 PSPHP1-201ENST00000450062 261 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 USP9YP12-201ENST00000450481 570 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 USP9YP34-201ENST00000453983 808 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AC146507.1-201ENST00000468335 354 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 RN7SL812P-201ENST00000493791 279 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AC093824.1-201ENST00000508796 343 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 NDUFB4P2-201ENST00000509515 391 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 OR5M7P-201ENST00000526140 972 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 EIF5A2P1-201ENST00000564027 460 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AC007224.1-201ENST00000564410 144 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AC141257.3-201ENST00000572906 215 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 MIR3913-1-201ENST00000577744 102 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AL353621.2-201ENST00000605340 133 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AC008250.2-201ENST00000615261 205 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AC063943.3-201ENST00000615562 356 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AL158196.1-201ENST00000616786 434 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 CDRT1-208ENST00000630868 794 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms