Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 RNA5SP513-201ENST00000364648 118 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 RHOT1P2-201ENST00000366423 333 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 RNU6-657P-201ENST00000383904 107 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 SNORA37-201ENST00000384504 129 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 SNORA48.7-201ENST00000391302 135 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AC025750.1-201ENST00000399891 379 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AL139095.3-201ENST00000419672 1203 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 RPS27AP14-201ENST00000422868 454 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 Z74021.1-201ENST00000423610 407 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 MTCYBP5-201ENST00000423752 1135 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 MTATP6P13-201ENST00000438531 667 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 EEF1A1P1-201ENST00000447052 739 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 RPL39P6-201ENST00000448289 150 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AC239809.1-201ENST00000450470 217 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 MTCO3P2-201ENST00000457365 171 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AC092757.1-201ENST00000467293 467 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AP000797.1-201ENST00000478870 387 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AC012158.1-204ENST00000483430 465 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 RN7SL691P-201ENST00000494487 301 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 BNIP3P41-201ENST00000503774 571 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AC109464.2-201ENST00000510242 943 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 PPBPP1-201ENST00000510807 373 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 RNA5SP49-201ENST00000516450 115 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 ZNF519P3-201ENST00000557158 1032 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AC091489.2-201ENST00000566263 604 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AC112187.2-201ENST00000604345 283 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AC008498.1-201ENST00000613012 531 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AL021997.2-201ENST00000615674 271 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AC068137.3-201ENST00000639191 341 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 AC073869.6-201ENST00000640656 341 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 MTND4P16-201ENST00000466108 1367 ntBASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 TEX21P-201ENST00000447107 1476 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 AC008725.1-201ENST00000605123 2263 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 RNA5SP52-201ENST00000362448 134 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 Y_RNA.516-201ENST00000384541 124 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 VN1R8P-201ENST00000407739 893 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 RNU2-66P-201ENST00000410650 161 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 RN7SKP33-201ENST00000410942 340 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 RPS20P14-201ENST00000412545 360 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 RPL21P91-201ENST00000429231 479 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 EEF1E1P1-201ENST00000446998 430 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 VN1R10P-201ENST00000447106 875 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 AL645939.1-201ENST00000453429 797 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 TPT1P7-201ENST00000458300 517 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 MEMO1P3-201ENST00000459811 302 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 RPL21P129-201ENST00000491732 478 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 AL132838.2-201ENST00000492041 314 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 AC096751.1-202ENST00000502691 1067 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 AC021678.1-201ENST00000505195 936 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 SLC25A15P5-201ENST00000508033 253 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 AC006499.6-201ENST00000511169 607 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 RNU6-150P-201ENST00000516237 95 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 RNA5SP73-201ENST00000516744 108 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 AC090151.1-201ENST00000520784 730 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 OR5G4P-201ENST00000525251 760 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms