Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 Y_RNA.269-201ENST00000364685 89 ntBASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 USP9YP20-201ENST00000419224 558 ntBASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 HMGN1P5-201ENST00000448591 263 ntBASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 RPL21P18-201ENST00000469899 480 ntBASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 RPL23AP45-201ENST00000476406 468 ntBASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 RPL23AP84-201ENST00000571193 464 ntBASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 AC006254.3-201ENST00000603353 884 ntBASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 AP000942.3-201ENST00000603702 160 ntBASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 AC004696.1-201ENST00000614345 607 ntBASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHANK2Q9UPX8 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHANK2Q9UPX8 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.66□□□□□ -1.82
SHANK2Q9UPX8 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.66□□□□□ -1.82
SHANK2Q9UPX8 Z73965.1-201ENST00000623412 2297 ntBASIC3.66□□□□□ -1.82
SHANK2Q9UPX8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
SHANK2Q9UPX8 AC007064.1-201ENST00000412238 351 ntBASIC3.66□□□□□ -1.82
SHANK2Q9UPX8 RPL7P52-201ENST00000449200 742 ntBASIC3.66□□□□□ -1.82
SHANK2Q9UPX8 VN1R17P-201ENST00000472048 1090 ntBASIC3.66□□□□□ -1.82
SHANK2Q9UPX8 AC034244.2-201ENST00000514668 858 ntBASIC3.66□□□□□ -1.82
SHANK2Q9UPX8 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.66□□□□□ -1.82
SHANK2Q9UPX8 SNORA35B-201ENST00000607417 129 ntBASIC3.66□□□□□ -1.82
SHANK2Q9UPX8 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.66□□□□□ -1.82
SHANK2Q9UPX8 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.66□□□□□ -1.82
SHANK2Q9UPX8 AL445437.1-201ENST00000623157 3087 ntBASIC3.66□□□□□ -1.82
SHANK2Q9UPX8 MTND5P27-201ENST00000428871 1720 ntBASIC3.65□□□□□ -1.82
SHANK2Q9UPX8 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
SHANK2Q9UPX8 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SHANK2Q9UPX8 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SHANK2Q9UPX8 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.65□□□□□ -1.83
SHANK2Q9UPX8 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.65□□□□□ -1.83
SHANK2Q9UPX8 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.65□□□□□ -1.83
SHANK2Q9UPX8 RNU1-73P-201ENST00000383971 164 ntBASIC3.65□□□□□ -1.83
SHANK2Q9UPX8 RNA5SP210-201ENST00000391034 120 ntBASIC3.65□□□□□ -1.83
SHANK2Q9UPX8 RNU2-22P-201ENST00000411266 212 ntBASIC3.65□□□□□ -1.83
SHANK2Q9UPX8 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.65□□□□□ -1.83
SHANK2Q9UPX8 AL606490.7-201ENST00000433136 191 ntBASIC3.65□□□□□ -1.83
SHANK2Q9UPX8 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.65□□□□□ -1.83
SHANK2Q9UPX8 COX6CP2-201ENST00000444980 225 ntBASIC3.65□□□□□ -1.83
SHANK2Q9UPX8 HMGB1P15-201ENST00000453854 435 ntBASIC3.65□□□□□ -1.83
SHANK2Q9UPX8 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
SHANK2Q9UPX8 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.65□□□□□ -1.83
SHANK2Q9UPX8 AC018630.1-201ENST00000541376 925 ntBASIC3.65□□□□□ -1.83
SHANK2Q9UPX8 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SHANK2Q9UPX8 AC022884.3-201ENST00000579571 248 ntBASIC3.65□□□□□ -1.83
SHANK2Q9UPX8 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.65□□□□□ -1.83
SHANK2Q9UPX8 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHANK2Q9UPX8 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SHANK2Q9UPX8 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.64□□□□□ -1.83
SHANK2Q9UPX8 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHANK2Q9UPX8 XPOTP1-201ENST00000443317 2398 ntBASIC3.64□□□□□ -1.83
SHANK2Q9UPX8 RNU6-1159P-201ENST00000362933 107 ntBASIC3.64□□□□□ -1.83
SHANK2Q9UPX8 AC012498.1-201ENST00000424037 437 ntBASIC3.64□□□□□ -1.83
SHANK2Q9UPX8 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.64□□□□□ -1.83
SHANK2Q9UPX8 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.64□□□□□ -1.83
SHANK2Q9UPX8 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.64□□□□□ -1.83
SHANK2Q9UPX8 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.64□□□□□ -1.83
SHANK2Q9UPX8 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.64□□□□□ -1.83
SHANK2Q9UPX8 AP006248.2-201ENST00000623309 592 ntBASIC3.64□□□□□ -1.83
SHANK2Q9UPX8 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHANK2Q9UPX8 AC104454.1-201ENST00000421341 1401 ntBASIC3.64□□□□□ -1.83
SHANK2Q9UPX8 SNORA51.4-201ENST00000364993 124 ntBASIC3.63□□□□□ -1.83
SHANK2Q9UPX8 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.63□□□□□ -1.83
SHANK2Q9UPX8 SNORD21-201ENST00000383953 95 ntBASIC3.63□□□□□ -1.83
SHANK2Q9UPX8 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.63□□□□□ -1.83
SHANK2Q9UPX8 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.63□□□□□ -1.83
SHANK2Q9UPX8 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.63□□□□□ -1.83
SHANK2Q9UPX8 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.63□□□□□ -1.83
SHANK2Q9UPX8 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.63□□□□□ -1.83
SHANK2Q9UPX8 CKS1BP7-201ENST00000522230 235 ntBASIC3.63□□□□□ -1.83
SHANK2Q9UPX8 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.63□□□□□ -1.83
SHANK2Q9UPX8 AC068313.1-201ENST00000604028 1008 ntBASIC3.63□□□□□ -1.83
SHANK2Q9UPX8 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.63□□□□□ -1.83
SHANK2Q9UPX8 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHANK2Q9UPX8 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SHANK2Q9UPX8 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.63□□□□□ -1.83
SHANK2Q9UPX8 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.63□□□□□ -1.83
SHANK2Q9UPX8 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.63□□□□□ -1.83
SHANK2Q9UPX8 MIR489-201ENST00000384923 84 ntBASIC3.62□□□□□ -1.83
SHANK2Q9UPX8 GSTA12P-201ENST00000402398 508 ntBASIC3.62□□□□□ -1.83
SHANK2Q9UPX8 SNORD88.1-201ENST00000408684 91 ntBASIC3.62□□□□□ -1.83
SHANK2Q9UPX8 RPL36AP33-201ENST00000450395 310 ntBASIC3.62□□□□□ -1.83
SHANK2Q9UPX8 OR4G11P-201ENST00000492842 939 ntBASIC3.62□□□□□ -1.83
SHANK2Q9UPX8 OR4H12P-201ENST00000556269 907 ntBASIC3.62□□□□□ -1.83
SHANK2Q9UPX8 MIR4498-201ENST00000577599 66 ntBASIC3.62□□□□□ -1.83
SHANK2Q9UPX8 OR4K7P-201ENST00000580232 945 ntBASIC3.62□□□□□ -1.83
SHANK2Q9UPX8 AC006116.7-201ENST00000590141 756 ntBASIC3.62□□□□□ -1.83
SHANK2Q9UPX8 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.62□□□□□ -1.83
SHANK2Q9UPX8 AC002543.1-201ENST00000299783 1954 ntBASIC3.62□□□□□ -1.83
SHANK2Q9UPX8 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
SHANK2Q9UPX8 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHANK2Q9UPX8 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms