Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 AC100778.3-201ENST00000580060 1750 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 U3.6-201ENST00000363622 211 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 MIR1178-201ENST00000408396 91 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 RNU2-2P-201ENST00000410396 191 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 USP9YP7-201ENST00000436723 430 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 AC073587.1-201ENST00000447093 876 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 USP9YP32-201ENST00000452432 430 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 AC009963.3-201ENST00000458090 486 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 NDUFB5P1-201ENST00000508134 564 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 SUMO2P18-201ENST00000518873 252 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 RPL10P18-201ENST00000519384 309 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 AP005597.2-201ENST00000526238 341 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 ATP5F1P5-201ENST00000526403 760 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 MIR5582-201ENST00000579697 68 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 AC015801.1-201ENST00000585651 153 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 OR7E18P-201ENST00000592589 702 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 RNU2-4P-201ENST00000606190 192 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 U2.15-201ENST00000611544 191 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 U2.16-201ENST00000613119 191 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 U2.12-201ENST00000613778 191 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 U2.9-201ENST00000615427 191 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 U2.11-201ENST00000616345 191 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 U2.2-201ENST00000616535 191 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 U2.3-201ENST00000617785 191 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 U2.19-201ENST00000618602 191 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 RNU2-1-201ENST00000618664 191 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 U2.6-201ENST00000619225 191 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 U2.5-201ENST00000619465 191 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 AC091544.5-201ENST00000620192 3815 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 U2.10-201ENST00000620268 191 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 SNX18P10-201ENST00000625014 519 ntBASIC6.47□□□□□ -1.37
LHX6Q9UPM6 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
LHX6Q9UPM6 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
LHX6Q9UPM6 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
LHX6Q9UPM6 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC6.46□□□□□ -1.37
LHX6Q9UPM6 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
LHX6Q9UPM6 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
LHX6Q9UPM6 Y_RNA.182-201ENST00000363880 111 ntBASIC6.46□□□□□ -1.38
LHX6Q9UPM6 SNORA74A-201ENST00000364089 198 ntBASIC6.46□□□□□ -1.38
LHX6Q9UPM6 RNU4-11P-201ENST00000365287 132 ntBASIC6.46□□□□□ -1.38
LHX6Q9UPM6 RN7SKP292-201ENST00000365522 317 ntBASIC6.46□□□□□ -1.38
LHX6Q9UPM6 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
LHX6Q9UPM6 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.46□□□□□ -1.38
LHX6Q9UPM6 RPL7AP73-201ENST00000413490 353 ntBASIC6.46□□□□□ -1.38
LHX6Q9UPM6 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC6.46□□□□□ -1.38
LHX6Q9UPM6 AC068228.1-201ENST00000461723 211 ntBASIC6.46□□□□□ -1.38
LHX6Q9UPM6 RN7SL180P-201ENST00000466769 294 ntBASIC6.46□□□□□ -1.38
LHX6Q9UPM6 RPL23AP2-201ENST00000471227 466 ntBASIC6.46□□□□□ -1.38
LHX6Q9UPM6 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.46□□□□□ -1.38
LHX6Q9UPM6 RAC1P5-201ENST00000512182 576 ntBASIC6.46□□□□□ -1.38
LHX6Q9UPM6 RNU6-168P-201ENST00000516189 101 ntBASIC6.46□□□□□ -1.38
LHX6Q9UPM6 RNU6-914P-201ENST00000516749 109 ntBASIC6.46□□□□□ -1.38
LHX6Q9UPM6 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.46□□□□□ -1.38
LHX6Q9UPM6 AC010547.6-201ENST00000571789 193 ntBASIC6.46□□□□□ -1.38
LHX6Q9UPM6 RPL23AP87-202ENST00000573039 466 ntBASIC6.46□□□□□ -1.38
LHX6Q9UPM6 B3GNTL1P2-201ENST00000603673 288 ntBASIC6.46□□□□□ -1.38
LHX6Q9UPM6 AC024940.4-201ENST00000605507 246 ntBASIC6.46□□□□□ -1.38
LHX6Q9UPM6 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC6.46□□□□□ -1.38
LHX6Q9UPM6 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.46□□□□□ -1.38
LHX6Q9UPM6 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
LHX6Q9UPM6 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
LHX6Q9UPM6 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
LHX6Q9UPM6 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
LHX6Q9UPM6 AC138915.4-201ENST00000565549 4147 ntBASIC6.46□□□□□ -1.38
LHX6Q9UPM6 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
LHX6Q9UPM6 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
LHX6Q9UPM6 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.46□□□□□ -1.38
LHX6Q9UPM6 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms