Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 SYF2P2-201ENST00000417620 583 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 TIMM9P2-201ENST00000419324 266 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4□□□□□ -1.77
SIX4Q9UIU6 AC233981.1-201ENST00000423224 461 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 AL035407.1-201ENST00000429211 571 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 RPS6P12-201ENST00000432491 726 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 AC010153.1-201ENST00000432862 727 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 AC098826.1-201ENST00000433943 471 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 B3GNT2P1-201ENST00000434960 952 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4□□□□□ -1.77
SIX4Q9UIU6 TAF9P1-201ENST00000445421 515 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4□□□□□ -1.77
SIX4Q9UIU6 AL133547.1-201ENST00000448546 220 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 AC006480.1-201ENST00000449887 378 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 TAF9P2-201ENST00000454958 515 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4□□□□□ -1.77
SIX4Q9UIU6 SNORA84-201ENST00000459229 133 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 SETP11-201ENST00000473027 690 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4□□□□□ -1.77
SIX4Q9UIU6 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4□□□□□ -1.77
SIX4Q9UIU6 TRMT10BP1-201ENST00000519377 943 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 AC027309.2-201ENST00000520566 192 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4□□□□□ -1.77
SIX4Q9UIU6 OR5AK1P-201ENST00000524837 922 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4□□□□□ -1.77
SIX4Q9UIU6 AL121766.1-201ENST00000547436 487 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 AL031985.2-201ENST00000600955 480 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 AF131215.7-201ENST00000602443 707 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SIX4Q9UIU6 AC120349.2-201ENST00000625002 298 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 AC026634.1-201ENST00000634369 198 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 AC119674.1-207ENST00000641355 633 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4□□□□□ -1.77
SIX4Q9UIU6 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
SIX4Q9UIU6 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4□□□□□ -1.77
SIX4Q9UIU6 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
SIX4Q9UIU6 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SIX4Q9UIU6 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4□□□□□ -1.77
SIX4Q9UIU6 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SIX4Q9UIU6 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AC011477.1-204ENST00000623416 1325 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AC012020.1-201ENST00000624541 1728 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 Y_RNA.25-201ENST00000362528 102 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 RNA5SP51-201ENST00000364750 119 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 RPL23AP29-201ENST00000397284 453 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 RPL21P17-201ENST00000397467 475 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 MIR1284-201ENST00000408337 120 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 IFNNP1-201ENST00000429219 553 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AC244035.1-201ENST00000430042 390 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AL590103.1-201ENST00000434488 307 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 NDUFB1P1-201ENST00000435191 180 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AL360221.1-201ENST00000445989 335 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AC009961.3-201ENST00000449832 765 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AL451050.1-201ENST00000450126 415 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 BTF3L4P4-201ENST00000506381 449 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 HMGB1P28-201ENST00000507778 552 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AC010342.1-201ENST00000514047 877 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 RNU1-95P-201ENST00000516357 160 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 SNORA67.7-201ENST00000516664 135 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 RNU1-128P-201ENST00000516704 160 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 RPL12P22-201ENST00000519073 490 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 SLC2A13P1-201ENST00000531560 322 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AC008011.1-201ENST00000545989 227 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AC007954.1-201ENST00000554198 494 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 SERPINE4P-201ENST00000554978 281 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AC006960.3-201ENST00000561845 705 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 EIF5A2P1-201ENST00000564027 460 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 ACTR3BP3-201ENST00000565577 979 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AL512347.1-201ENST00000566420 503 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 BRDTP1-201ENST00000605735 677 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AC091946.2-201ENST00000606105 291 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms