Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AL354707.3-201ENST00000427308 331 ntBASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 PSMA2P3-201ENST00000429685 675 ntBASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 UBE2V1P13-201ENST00000436983 439 ntBASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 HIGD1AP11-201ENST00000438361 280 ntBASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 AC011816.1-201ENST00000441346 546 ntBASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 AL359955.2-201ENST00000445380 353 ntBASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 AC104073.1-201ENST00000451988 151 ntBASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 BX276092.4-201ENST00000452056 248 ntBASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 PLGLA-201ENST00000465668 449 ntBASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 AP002453.1-201ENST00000492327 668 ntBASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 SNORA40.14-201ENST00000516543 86 ntBASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 RNU5B-3P-201ENST00000516601 115 ntBASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 RN7SKP277-201ENST00000516895 283 ntBASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 IGKV2D-23-201ENST00000518179 286 ntBASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 AC112191.2-201ENST00000522428 333 ntBASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 MRPS21P8-201ENST00000569196 235 ntBASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 AC006557.5-201ENST00000603126 811 ntBASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 AC022467.1-201ENST00000614738 749 ntBASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 AL137067.2-201ENST00000621202 131 ntBASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 AC000123.2-201ENST00000623124 461 ntBASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 MIR4496-201ENST00000635896 61 ntBASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 AC130650.2-201ENST00000618736 2403 ntBASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CUEDC1Q9NWM3 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 RNU6-511P-201ENST00000363496 107 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 RNU1-130P-201ENST00000363930 160 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 RNVU1-3-201ENST00000364313 161 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 SNORD115-7-201ENST00000365306 82 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 RNU6-1081P-201ENST00000384537 107 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 SAR1AP2-201ENST00000392696 594 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 SNRPEP6-201ENST00000407465 277 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 RNA5SP178-201ENST00000410380 128 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 RNU6-55P-201ENST00000411092 107 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 EIF4A1P3-201ENST00000411521 244 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 AC116036.1-201ENST00000412199 367 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 AL451074.5-201ENST00000415894 435 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 AC079355.1-201ENST00000421770 223 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 PGAM1P13-201ENST00000507497 754 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 IGLVIV-53-201ENST00000520107 367 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 SUB1P3-201ENST00000564581 315 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 MIR3941-201ENST00000582572 103 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 AC020910.3-201ENST00000603701 874 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 AP001823.1-201ENST00000604056 1003 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 AC024884.1-201ENST00000620583 399 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 AP000843.1-201ENST00000624880 701 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 CYP3A51P-201ENST00000633513 256 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 AC055839.1-201ENST00000634467 498 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 AC024651.2-201ENST00000562480 2098 ntBASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
CUEDC1Q9NWM3 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CUEDC1Q9NWM3 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.94□□□□□ -1.46
CUEDC1Q9NWM3 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms