Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 RN7SKP31-201ENST00000516354 278 ntBASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 AC008127.2-201ENST00000549925 1075 ntBASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 AL132857.1-201ENST00000555180 708 ntBASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 AC006270.2-201ENST00000578523 652 ntBASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 AC106052.1-201ENST00000608029 497 ntBASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 AL392048.1-201ENST00000613946 534 ntBASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 AC073968.1-201ENST00000618594 637 ntBASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 CR381572.1-201ENST00000625098 102 ntBASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 AC068647.1-201ENST00000489539 2265 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 AC010733.2-201ENST00000589496 5702 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 AP001486.2-201ENST00000561652 5113 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 FRG1CP-201ENST00000358464 769 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 RNU6-216P-201ENST00000363282 104 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 RNU5D-1-201ENST00000363299 116 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 RNU6-560P-201ENST00000364007 108 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 SNORA73.2-201ENST00000364946 201 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 MIR23B-201ENST00000384832 97 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 RPL31P1-201ENST00000398116 372 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 MTND4LP20-201ENST00000402379 270 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 EI24P1-201ENST00000416584 867 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 AC092648.1-201ENST00000425870 423 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 MTCO2P25-201ENST00000447065 681 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 PTGES3P5-201ENST00000455109 434 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 SNORD105B-201ENST00000458770 79 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 SNORA84-201ENST00000459229 133 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 RN7SL594P-201ENST00000470590 287 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 AC078918.1-201ENST00000498515 228 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 AC023141.12-201ENST00000512399 199 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 MTND2P32-201ENST00000521584 1038 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 AC010928.3-201ENST00000587712 541 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 AC006116.10-201ENST00000591836 581 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 DPRXP5-201ENST00000604662 539 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 AC034229.4-201ENST00000607861 441 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 AL159169.3-201ENST00000608871 561 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 AP001521.1-201ENST00000609150 300 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 C2orf27A-204ENST00000623058 969 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 AL034408.1-202ENST00000636088 415 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 AC138649.5-201ENST00000637456 137 ntBASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SMC4Q9NTJ3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 GDI2P1-201ENST00000429312 1336 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 CDR1-202ENST00000625883 1485 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 NACA3P-201ENST00000359690 648 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 RNVU1-3-201ENST00000364313 161 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 RNU4-68P-201ENST00000364314 141 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 RNU6-657P-201ENST00000383904 107 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 RNU6-837P-201ENST00000391056 108 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 AL121972.1-201ENST00000402023 252 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 ERHP2-201ENST00000402323 299 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 AL161449.1-201ENST00000414531 1199 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 FNDC3CP-201ENST00000420795 1155 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 AL035410.1-201ENST00000427409 427 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 CYCSP4-201ENST00000429682 331 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 Z80107.1-201ENST00000436830 412 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 MTCYBP11-201ENST00000447254 1109 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 AC091564.1-201ENST00000464563 479 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 RN7SKP13-201ENST00000515933 244 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 RNU2-27P-201ENST00000516185 142 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 RNA5SP309-201ENST00000516670 106 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms