Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 MTND4P16-201ENST00000466108 1367 ntBASIC3.89□□□□□ -1.79
SLC6A13Q9NSD5 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AL161781.1-201ENST00000354277 403 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 SNORA62-201ENST00000365493 153 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 SKINT1L-201ENST00000401057 817 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 RPS3AP23-201ENST00000401762 784 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AL021407.1-201ENST00000404531 386 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 MIR1305-201ENST00000408300 86 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 MIR1302-8-201ENST00000408342 128 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 TPMTP3-201ENST00000411928 735 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AC245052.5-201ENST00000416320 649 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AC092647.1-201ENST00000420654 287 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 MED14P1-201ENST00000430517 648 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 RPS29P17-201ENST00000430795 166 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AC091390.1-201ENST00000433904 331 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 MTCYBP45-201ENST00000435243 565 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 RSU1P2-202ENST00000437884 485 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 LSM1P1-201ENST00000438629 273 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AC006011.1-201ENST00000442758 349 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 TPT1P12-201ENST00000448968 492 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 ZNF114P1-201ENST00000453500 292 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 RPL23AP24-201ENST00000458203 385 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AC109486.1-201ENST00000486833 374 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AC022447.3-201ENST00000506865 495 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 RNU7-143P-201ENST00000516781 65 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AC105233.3-201ENST00000531125 744 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AP004247.1-201ENST00000531556 1289 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AC092851.1-201ENST00000535964 478 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 TOMM20P2-201ENST00000540082 421 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 PCMTD1P2-201ENST00000565017 355 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 BNIP3P23-201ENST00000599655 511 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AC010620.1-201ENST00000601088 1102 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AL161729.3-201ENST00000603533 673 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AL365503.1-201ENST00000605247 905 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 MIR4727-201ENST00000622232 55 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SLC6A13Q9NSD5 CR381670.1-201ENST00000624291 1693 ntBASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 AC010300.1-201ENST00000600671 5134 ntBASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 AC007685.1-201ENST00000329806 452 ntBASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 AL672167.1-206ENST00000356293 943 ntBASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 RNA5SP258-201ENST00000362750 119 ntBASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 RNA5SP447-201ENST00000363749 119 ntBASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 RNU6-501P-201ENST00000364072 100 ntBASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 RNU4-40P-201ENST00000364351 143 ntBASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 RNU6-744P-201ENST00000365557 107 ntBASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 RNU6-1316P-201ENST00000384242 108 ntBASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 AL583834.1-201ENST00000406943 343 ntBASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 AC244098.2-201ENST00000422068 99 ntBASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 AL513174.1-201ENST00000423182 629 ntBASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 AL732292.1-201ENST00000426692 226 ntBASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 AL358472.1-201ENST00000431295 329 ntBASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 MTND1P30-201ENST00000441241 901 ntBASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 MTND2P4-201ENST00000445034 1004 ntBASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 snoU13.8-201ENST00000458890 104 ntBASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 AC041039.1-201ENST00000485656 536 ntBASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 HMGB1P36-201ENST00000487709 576 ntBASIC3.87□□□□□ -1.79
SLC6A13Q9NSD5 RPS4XP15-201ENST00000489210 795 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms