Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC002456.2-201ENST00000509356 380 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 LTV1P1-201ENST00000510683 1237 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AC139495.1-202ENST00000513164 354 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 RN7SKP21-201ENST00000516503 220 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 RNA5SP309-201ENST00000516670 106 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 NDUFA5P2-201ENST00000519723 344 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 ARL2BPP5-201ENST00000523141 481 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AP000790.1-201ENST00000528891 737 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 OR8R1P-201ENST00000543943 764 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AP001180.3-201ENST00000582221 145 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AC067852.4-201ENST00000590314 478 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AC067959.1-201ENST00000604334 379 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AL137849.1-201ENST00000604767 169 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AL359535.1-201ENST00000612100 1087 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AL031667.3-201ENST00000620124 655 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 Z69908.1-201ENST00000622603 247 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AC231657.1-201ENST00000624313 397 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AC091965.5-201ENST00000624785 342 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AC092192.1-201ENST00000633154 1018 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 MTND4P34-201ENST00000572715 1371 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AL390862.1-201ENST00000635467 1469 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 SAGE2P-201ENST00000420011 2126 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 MTND5P24-201ENST00000438892 1767 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
PCDH9Q9HC56 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 RNU6-441P-201ENST00000384545 106 ntBASIC3.96□□□□□ -1.78
PCDH9Q9HC56 CYCSP45-201ENST00000402289 315 ntBASIC3.96□□□□□ -1.78
PCDH9Q9HC56 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.96□□□□□ -1.78
PCDH9Q9HC56 Z97055.1-201ENST00000419730 712 ntBASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AC019178.2-201ENST00000423595 505 ntBASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AC093698.1-201ENST00000423843 571 ntBASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AL035407.1-201ENST00000429211 571 ntBASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 MTND2P19-201ENST00000449129 1012 ntBASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AC009961.3-201ENST00000449832 765 ntBASIC3.96□□□□□ -1.78
PCDH9Q9HC56 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 MTCO3P11-201ENST00000455103 774 ntBASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AC092757.1-201ENST00000467293 467 ntBASIC3.96□□□□□ -1.78
PCDH9Q9HC56 PPIAP15-201ENST00000479662 484 ntBASIC3.96□□□□□ -1.78
PCDH9Q9HC56 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AC080014.1-201ENST00000496877 1201 ntBASIC3.96□□□□□ -1.78
PCDH9Q9HC56 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 DSTNP2-201ENST00000504533 515 ntBASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 MTCYBP43-201ENST00000513621 740 ntBASIC3.96□□□□□ -1.78
PCDH9Q9HC56 RNU6-583P-201ENST00000516012 92 ntBASIC3.96□□□□□ -1.78
PCDH9Q9HC56 RN7SKP209-201ENST00000516888 304 ntBASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AC107982.3-201ENST00000584957 985 ntBASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AF131215.7-201ENST00000602443 707 ntBASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AL606490.9-201ENST00000603331 271 ntBASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AC135507.1-201ENST00000607214 561 ntBASIC3.96□□□□□ -1.78
PCDH9Q9HC56 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AC068831.8-201ENST00000620171 435 ntBASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AC079228.1-201ENST00000624774 1049 ntBASIC3.96□□□□□ -1.78
PCDH9Q9HC56 AL031985.3-201ENST00000565390 2449 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 194 ms