Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 AC004817.4-201ENST00000602396 3625 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 Y_RNA.128-201ENST00000363391 112 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 Y_RNA.144-201ENST00000363521 113 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 Y_RNA.315-201ENST00000365117 102 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 RNU1-74P-201ENST00000384108 171 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 RNU6-1160P-201ENST00000384546 104 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 MIR223-201ENST00000385204 110 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AL035079.1-201ENST00000405210 287 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 CHEK2P3-201ENST00000416118 248 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AL645937.1-202ENST00000421799 937 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC092832.1-201ENST00000422934 400 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 EI24P4-201ENST00000423683 1078 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 MTND3P2-201ENST00000438452 342 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AL163193.1-201ENST00000444895 788 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC091180.1-201ENST00000462104 372 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 HMGN2P26-201ENST00000463169 339 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC130509.1-201ENST00000464158 433 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC027575.1-201ENST00000481064 460 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC093267.1-201ENST00000489176 961 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC006499.3-201ENST00000506077 748 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 RNU6-1170P-201ENST00000515974 106 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 IGLV2-28-201ENST00000520681 304 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC018442.3-201ENST00000523025 183 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 OR4T1P-201ENST00000554933 911 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC006349.1-201ENST00000555526 235 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC114947.2-201ENST00000565748 2125 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 FRG2DP-202ENST00000566967 323 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC006116.10-201ENST00000591836 581 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC008737.2-201ENST00000599446 118 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC004853.1-201ENST00000604902 698 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC103710.3-201ENST00000608157 948 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC243654.2-201ENST00000612843 443 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC079684.1-201ENST00000621405 437 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC000123.2-201ENST00000623124 461 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 AC079597.1-201ENST00000624306 508 ntBASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.59□□□□□ -1.67
SEC61A2Q9H9S3 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
SEC61A2Q9H9S3 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 AL161781.1-201ENST00000354277 403 ntBASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 RNU6-28P-201ENST00000362378 107 ntBASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 UBBP2-201ENST00000376781 231 ntBASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 RNU1-106P-201ENST00000384382 164 ntBASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 RNU6-831P-201ENST00000384548 107 ntBASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 AL359643.1-201ENST00000404109 423 ntBASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 AL451054.2-201ENST00000420896 202 ntBASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 AC012065.2-201ENST00000421295 375 ntBASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 AL356276.2-201ENST00000435919 558 ntBASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 AP000936.3-201ENST00000438127 255 ntBASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 MTND3P16-201ENST00000452205 344 ntBASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms