Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 AC233263.6-201ENST00000631132 1963 ntBASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 MIR153-1-201ENST00000384914 90 ntBASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 RNU6-796P-201ENST00000391086 107 ntBASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 ATF1P1-201ENST00000406040 927 ntBASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 AC092745.2-202ENST00000411880 369 ntBASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 PRELID3BP11-201ENST00000414230 479 ntBASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 AL357078.2-201ENST00000416486 427 ntBASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 AC012498.1-201ENST00000424037 437 ntBASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 AC009969.1-201ENST00000438726 172 ntBASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 HMGB1P48-201ENST00000446155 598 ntBASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 MRPL35P4-201ENST00000453682 566 ntBASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 RPL21P103-201ENST00000479921 488 ntBASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 AC010468.3-201ENST00000508225 458 ntBASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 AC009812.2-201ENST00000517657 457 ntBASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 IGHV3-76-201ENST00000522465 295 ntBASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 AC010306.1-201ENST00000523223 1117 ntBASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 CYCSP41-201ENST00000616920 296 ntBASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 MTND5P19-201ENST00000424872 1794 ntBASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RPAP1Q9BWH6 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 AC025125.1-201ENST00000624743 1922 ntBASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 ENSAP3-201ENST00000312710 333 ntBASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 RNA5SP27-201ENST00000363839 119 ntBASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 RNU6-650P-201ENST00000365658 111 ntBASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 AC110754.1-201ENST00000399740 601 ntBASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 UBE2V1P11-201ENST00000411559 285 ntBASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 AC073310.1-201ENST00000423226 1033 ntBASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 AL513175.1-201ENST00000431492 780 ntBASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 RPS20P32-201ENST00000456044 356 ntBASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 AC117440.1-201ENST00000474107 571 ntBASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 POU5F1P7-201ENST00000508759 541 ntBASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 RNU6-1102P-201ENST00000516149 96 ntBASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 SNORA76.2-201ENST00000517095 137 ntBASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 AC105429.2-201ENST00000610567 517 ntBASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 AP006248.3-201ENST00000623580 594 ntBASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 AL672296.1-201ENST00000427780 2158 ntBASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.65□□□□□ -1.82
RPAP1Q9BWH6 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.65□□□□□ -1.83
RPAP1Q9BWH6 AC096644.4-201ENST00000563417 2912 ntBASIC3.65□□□□□ -1.83
RPAP1Q9BWH6 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RPAP1Q9BWH6 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RPAP1Q9BWH6 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 AL512646.1-201ENST00000269395 1077 ntBASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 FTLP6-201ENST00000355274 422 ntBASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 RNU2-21P-201ENST00000410368 188 ntBASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 EEF1A1P41-201ENST00000414667 207 ntBASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 AL158825.1-201ENST00000414735 521 ntBASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 RPL31P45-201ENST00000419532 356 ntBASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 RNFT1P2-201ENST00000443064 757 ntBASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 AL135938.1-201ENST00000443141 297 ntBASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 SNORD108-201ENST00000459332 71 ntBASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 AC126121.1-201ENST00000482313 553 ntBASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 RPS4XP13-201ENST00000483219 789 ntBASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 RN7SL283P-201ENST00000489055 303 ntBASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 AC012170.1-201ENST00000495139 359 ntBASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 RPL7L1P13-201ENST00000511702 739 ntBASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 RN7SKP234-201ENST00000517173 224 ntBASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 RPL12P22-201ENST00000519073 490 ntBASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms