Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 snoU13.24-201ENST00000458998 104 ntBASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 RN7SL329P-201ENST00000467740 299 ntBASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 AC008953.1-201ENST00000497334 318 ntBASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 AC022832.1-201ENST00000530718 645 ntBASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 AP005205.1-201ENST00000563503 508 ntBASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 AC015917.1-201ENST00000579654 510 ntBASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 BNIP3P10-201ENST00000605360 577 ntBASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 AC025253.1-201ENST00000613623 543 ntBASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 AP001350.1-201ENST00000601906 1524 ntBASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 AL137003.2-201ENST00000606924 2538 ntBASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRAIPQ9BWF2 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.96□□□□□ -1.45
TRAIPQ9BWF2 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
TRAIPQ9BWF2 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.96□□□□□ -1.45
TRAIPQ9BWF2 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 OR4F13P-202ENST00000560066 2054 ntBASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 RNU6-701P-201ENST00000384059 107 ntBASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 AL359643.1-201ENST00000404109 423 ntBASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 NDUFS5P1-201ENST00000405668 289 ntBASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 RNU2-29P-201ENST00000410423 189 ntBASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 AC096921.1-201ENST00000411661 375 ntBASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 AC012498.1-201ENST00000424037 437 ntBASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 RIMKLBP2-201ENST00000424737 654 ntBASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 PTMAP6-201ENST00000439110 327 ntBASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 FABP5P13-201ENST00000452144 328 ntBASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 snoU13.4-201ENST00000458916 104 ntBASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 AP001029.3-201ENST00000588063 596 ntBASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 AC005255.1-201ENST00000593748 216 ntBASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 AC133644.2-201ENST00000608142 540 ntBASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 AC092794.2-201ENST00000620933 563 ntBASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 AL360181.4-201ENST00000621752 134 ntBASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 MIR6730-201ENST00000622213 67 ntBASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 AC007998.5-201ENST00000622938 237 ntBASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRAIPQ9BWF2 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 RNU6-1287P-201ENST00000362914 107 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 RNU6-451P-201ENST00000362921 107 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 RNA5SP326-201ENST00000363209 110 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 SNORA7.2-201ENST00000364446 145 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 Y_RNA.303-201ENST00000364998 94 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 SNORA67-201ENST00000384423 137 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 RNU6-1060P-201ENST00000384664 107 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 AL645927.1-201ENST00000396783 406 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 RNU6-1068P-201ENST00000410958 103 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 RPS23P10-201ENST00000416185 486 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 MTATP6P4-201ENST00000427725 675 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 AC079780.1-201ENST00000428259 207 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 USP9YP7-201ENST00000436723 430 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 HMGN2P21-201ENST00000447764 270 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 USP9YP32-201ENST00000452432 430 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 RPL23AP31-201ENST00000456160 467 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 RPS17P5-201ENST00000498293 408 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms