Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AC097468.3-201ENST00000607956 456 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 AL353748.2-201ENST00000622148 471 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 AC120349.3-201ENST00000624377 529 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 AL031985.3-201ENST00000565390 2449 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 SCN1A-220ENST00000641603 12506 ntBASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 RNU6-853P-201ENST00000364306 107 ntBASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 SNORA70.2-201ENST00000364506 135 ntBASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 MIR135A2-201ENST00000384854 100 ntBASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 RNU6-882P-201ENST00000391025 103 ntBASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 AL121834.1-202ENST00000404494 277 ntBASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 RPS29P17-201ENST00000430795 166 ntBASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 CETN4P-201ENST00000432407 469 ntBASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 RPL7P34-201ENST00000433316 712 ntBASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 AC004866.2-201ENST00000438285 481 ntBASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 AL353748.1-201ENST00000440753 474 ntBASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 RAC1P7-201ENST00000445367 377 ntBASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 MTCO2P6-201ENST00000463134 685 ntBASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 AC021382.1-201ENST00000483523 359 ntBASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 AC110792.1-201ENST00000491826 472 ntBASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 MRPS33P3-201ENST00000513456 322 ntBASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 RN7SKP122-201ENST00000515923 296 ntBASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 RNU6-528P-201ENST00000516926 100 ntBASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 RFPL1S-203ENST00000539579 330 ntBASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 AC034268.2-201ENST00000571784 482 ntBASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 AL163642.2-201ENST00000604722 1019 ntBASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 AC090425.2-201ENST00000608818 501 ntBASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HERPUD2Q9BSE4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 RNU1-132P-201ENST00000364300 164 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 DEFB109C-201ENST00000382575 264 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 DEFB109B-201ENST00000382656 264 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 AL049545.1-201ENST00000401856 572 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 MIR1305-201ENST00000408300 86 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 RNU2-43P-201ENST00000410306 190 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 AC011933.1-201ENST00000413334 321 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 EIF1P3-201ENST00000423841 334 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 BX119904.4-201ENST00000424402 301 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 UBE2V1P13-201ENST00000436983 439 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 CYCSP43-201ENST00000438233 310 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 AL512326.1-201ENST00000443050 721 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 SNORD121B-201ENST00000458838 81 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 AC116533.1-201ENST00000459748 321 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 AC109327.1-201ENST00000471666 403 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 RPS29P19-201ENST00000479709 171 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms