Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 NANOGP2-201ENST00000435391 727 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.58□□□□□ -2
LINC00477Q96M19 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.58□□□□□ -2
LINC00477Q96M19 AL645638.1-201ENST00000440519 361 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 AL034418.1-201ENST00000448675 860 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.58□□□□□ -2
LINC00477Q96M19 HMGN1P18-201ENST00000457642 277 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 RPS27P29-201ENST00000463110 252 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.58□□□□□ -2
LINC00477Q96M19 RN7SL385P-201ENST00000468873 276 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.58□□□□□ -2
LINC00477Q96M19 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.58□□□□□ -2
LINC00477Q96M19 AC110768.1-201ENST00000509222 400 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 NPM1P41-201ENST00000512920 831 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.58□□□□□ -2
LINC00477Q96M19 AC110760.3-202ENST00000515177 371 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 RN7SKP18-201ENST00000516005 275 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 SNORA70.18-201ENST00000516696 98 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 RNU6-1028P-201ENST00000517164 93 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.58□□□□□ -2
LINC00477Q96M19 AC007991.1-201ENST00000522680 631 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 MTCO3P15-201ENST00000526563 574 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 TRAV37-201ENST00000553906 342 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.58□□□□□ -2
LINC00477Q96M19 AC044913.1-201ENST00000557200 430 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.58□□□□□ -2
LINC00477Q96M19 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC2.58□□□□□ -2
LINC00477Q96M19 VN1R88P-201ENST00000596787 292 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.58□□□□□ -2
LINC00477Q96M19 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.58□□□□□ -2
LINC00477Q96M19 AL445435.1-201ENST00000604232 665 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 AC002487.1-201ENST00000604565 994 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 AC073387.2-201ENST00000604797 784 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 RNU4-5P-201ENST00000607255 135 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 AC009974.1-201ENST00000608881 455 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.58□□□□□ -2
LINC00477Q96M19 U4.6-201ENST00000621618 127 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 AL109659.3-201ENST00000624985 950 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 AL122126.1-201ENST00000546905 1318 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.58□□□□□ -2
LINC00477Q96M19 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
LINC00477Q96M19 MTND5P27-201ENST00000428871 1720 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
LINC00477Q96M19 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.57□□□□□ -2
LINC00477Q96M19 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.57□□□□□ -2
LINC00477Q96M19 RNA5SP51-201ENST00000364750 119 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
LINC00477Q96M19 RNU6-1151P-201ENST00000384684 107 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 MIR217-201ENST00000384817 110 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 RNU6-837P-201ENST00000391056 108 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 RN7SKP111-201ENST00000410349 271 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 RNU6-272P-201ENST00000411028 104 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 MTCO2P8-201ENST00000412213 658 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.57□□□□□ -2
LINC00477Q96M19 AL035423.1-201ENST00000420331 213 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.57□□□□□ -2
LINC00477Q96M19 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.57□□□□□ -2
LINC00477Q96M19 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.57□□□□□ -2
LINC00477Q96M19 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.57□□□□□ -2
LINC00477Q96M19 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC2.57□□□□□ -2
LINC00477Q96M19 H2AFZP6-201ENST00000444403 394 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
LINC00477Q96M19 AC112492.1-201ENST00000449607 712 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.57□□□□□ -2
LINC00477Q96M19 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.57□□□□□ -2
LINC00477Q96M19 NUTF2P7-201ENST00000453086 375 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.57□□□□□ -2
LINC00477Q96M19 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.57□□□□□ -2
LINC00477Q96M19 RPS4XP2-201ENST00000458402 793 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.57□□□□□ -2
LINC00477Q96M19 AC021146.5-201ENST00000503544 545 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.57□□□□□ -2
LINC00477Q96M19 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.57□□□□□ -2
LINC00477Q96M19 AC008837.1-201ENST00000511513 412 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.57□□□□□ -2
LINC00477Q96M19 AC023632.1-201ENST00000518463 375 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.57□□□□□ -2
LINC00477Q96M19 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC2.57□□□□□ -2
LINC00477Q96M19 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.57□□□□□ -2
LINC00477Q96M19 AC104417.1-201ENST00000523974 751 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.57□□□□□ -2
LINC00477Q96M19 AP000790.1-201ENST00000528891 737 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 AC124293.1-201ENST00000530034 493 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2.57□□□□□ -2
LINC00477Q96M19 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.57□□□□□ -2
LINC00477Q96M19 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.57□□□□□ -2
LINC00477Q96M19 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.57□□□□□ -2
LINC00477Q96M19 AC006518.1-201ENST00000541449 943 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.57□□□□□ -2
LINC00477Q96M19 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.57□□□□□ -2
LINC00477Q96M19 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.57□□□□□ -2
LINC00477Q96M19 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LINC00477Q96M19 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.57□□□□□ -2
LINC00477Q96M19 BDH2P1-201ENST00000602288 736 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.57□□□□□ -2
LINC00477Q96M19 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
LINC00477Q96M19 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.57□□□□□ -2
LINC00477Q96M19 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.57□□□□□ -2
LINC00477Q96M19 AL121895.2-201ENST00000619558 447 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms