Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 GNG5P1-201ENST00000255500 204 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 Y_RNA.1-201ENST00000352915 104 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 Y_RNA.295-201ENST00000364918 102 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 MIR659-201ENST00000384963 97 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 RNU6-876P-201ENST00000391295 104 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 DSTNP4-201ENST00000399472 474 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 GLULP6-201ENST00000399502 913 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 RPL7P25-201ENST00000404151 721 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 RNA5SP146-201ENST00000410743 123 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 GSTM3P2-201ENST00000412746 530 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 RPS3AP9-201ENST00000417027 792 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 AC016831.2-201ENST00000417179 352 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 AC012498.1-201ENST00000424037 437 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 NPM1P24-201ENST00000428039 894 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 AC132479.1-201ENST00000449160 144 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 AC099563.1-201ENST00000456086 418 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 snoU13.1-201ENST00000459157 104 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 IGLV2-34-201ENST00000490007 283 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 RN7SL591P-201ENST00000496150 292 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 STMN1P2-201ENST00000508435 439 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 Y_RNA.693-201ENST00000516641 110 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 Y_RNA.704-201ENST00000516851 102 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 AP001880.2-201ENST00000538233 448 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 AC107954.1-201ENST00000565906 727 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 AL160290.3-201ENST00000604869 165 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 AC010201.1-201ENST00000605051 540 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 AC090948.2-201ENST00000607363 564 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 AP001521.2-201ENST00000608772 546 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 AL020991.1-201ENST00000612314 373 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 Y_RNA.804-201ENST00000615262 101 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 AC087385.3-201ENST00000620477 187 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 AC009268.2-201ENST00000621925 457 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 AP003400.5-201ENST00000624827 617 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 AC068724.3-201ENST00000625906 87 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 NEAT1-202ENST00000501122 22743 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 MTCO1P7-201ENST00000419523 1542 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 MUC2-202ENST00000613187 4845 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 AC020633.1-201ENST00000468439 2247 ntBASIC5.31□□□□□ -1.56
CHAMP1Q96JM3 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 CBX3P1-201ENST00000325243 554 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 Y_RNA.11-201ENST00000362375 109 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 Y_RNA.46-201ENST00000362695 102 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 RNU6-483P-201ENST00000384088 108 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 RNA5SP87-201ENST00000384155 118 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 RN7SKP285-201ENST00000410137 318 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 AMD1P2-201ENST00000412936 992 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 RPL18P10-201ENST00000425606 538 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 AC006946.1-201ENST00000429106 328 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 RPL36P19-201ENST00000430744 301 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 AC002381.1-201ENST00000447049 280 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 RPL7AP28-201ENST00000464513 571 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 Y_RNA.672-201ENST00000516289 104 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 AC009643.1-201ENST00000532030 391 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 AP006289.1-201ENST00000538089 277 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 AC008127.2-201ENST00000549925 1075 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 AC060780.3-201ENST00000589464 80 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 PSMA6P4-201ENST00000603247 718 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 AC245014.2-201ENST00000603689 287 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 AC112230.1-201ENST00000604342 547 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 AC007363.1-201ENST00000604736 620 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 AC246785.4-201ENST00000605374 287 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 AC011816.2-201ENST00000607089 556 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 AL732618.1-201ENST00000623251 301 ntBASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms