Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 RNU6-1249P-201ENST00000363237 111 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.14□□□□□ -1.91
UBE2E3Q969T4 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.14□□□□□ -1.91
UBE2E3Q969T4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.14□□□□□ -1.91
UBE2E3Q969T4 RNA5SP44-201ENST00000410446 133 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 HMGN1P24-201ENST00000412282 298 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 RPL32P35-201ENST00000415214 394 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 RAD23BP2-201ENST00000416003 1207 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
UBE2E3Q969T4 AC093698.1-201ENST00000423843 571 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.14□□□□□ -1.91
UBE2E3Q969T4 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.14□□□□□ -1.91
UBE2E3Q969T4 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.14□□□□□ -1.91
UBE2E3Q969T4 AC241584.1-201ENST00000438469 1241 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.14□□□□□ -1.91
UBE2E3Q969T4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.14□□□□□ -1.91
UBE2E3Q969T4 HMGN2P16-201ENST00000456802 261 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 PABPC1P3-201ENST00000469174 459 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 RPL7P38-201ENST00000488396 739 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 AC108078.3-201ENST00000502633 489 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 AC026414.1-201ENST00000504046 698 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 IGKV2D-23-201ENST00000518179 286 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 AC023632.1-201ENST00000518463 375 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 DUXAP2-201ENST00000519198 589 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.14□□□□□ -1.91
UBE2E3Q969T4 AP003066.2-201ENST00000529375 555 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 AC007458.1-201ENST00000542812 373 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 SYF2P1-201ENST00000550658 413 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.14□□□□□ -1.91
UBE2E3Q969T4 AC044913.1-201ENST00000557200 430 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.14□□□□□ -1.91
UBE2E3Q969T4 VN1R87P-201ENST00000596706 487 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 AL162713.1-201ENST00000604480 262 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 AC103710.3-201ENST00000608157 948 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 AC000367.1-201ENST00000452711 1766 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
UBE2E3Q969T4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
UBE2E3Q969T4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.13□□□□□ -1.91
UBE2E3Q969T4 AC004925.1-201ENST00000624256 2706 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 RNU1-70P-201ENST00000362618 164 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 RNU6-821P-201ENST00000390995 107 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 AL136133.1-201ENST00000413694 376 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 AC027644.1-201ENST00000419595 298 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 AC069157.1-201ENST00000421749 137 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 RPF2P1-201ENST00000424137 906 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.13□□□□□ -1.91
UBE2E3Q969T4 ARL4AP4-201ENST00000434170 518 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 AP000949.1-201ENST00000438328 629 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.13□□□□□ -1.91
UBE2E3Q969T4 AC115115.1-201ENST00000449927 248 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.13□□□□□ -1.91
UBE2E3Q969T4 CFTRP1-201ENST00000456646 183 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 SNORA84-201ENST00000459229 133 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 AC010468.1-201ENST00000461022 817 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 RN7SL442P-201ENST00000473804 320 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 VPS26AP1-201ENST00000483197 979 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 NIPA2P2-201ENST00000496376 1083 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 RNA5SP217-201ENST00000515959 91 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.13□□□□□ -1.91
UBE2E3Q969T4 AC104027.1-201ENST00000521887 300 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 MTND1P36-201ENST00000522384 936 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.13□□□□□ -1.91
UBE2E3Q969T4 AC019227.1-201ENST00000526902 510 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.13□□□□□ -1.91
UBE2E3Q969T4 AP001317.1-201ENST00000531194 960 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
UBE2E3Q969T4 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.13□□□□□ -1.91
UBE2E3Q969T4 AL121603.1-201ENST00000553815 142 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 AC009101.1-201ENST00000568135 242 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 AC008507.1-201ENST00000587506 734 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.13□□□□□ -1.91
UBE2E3Q969T4 AL591516.1-201ENST00000611326 274 ntBASIC3.13□□□□□ -1.91
UBE2E3Q969T4 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
UBE2E3Q969T4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
UBE2E3Q969T4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
UBE2E3Q969T4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
UBE2E3Q969T4 AP001148.1-201ENST00000624124 2359 ntBASIC3.12□□□□□ -1.91
UBE2E3Q969T4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBE2E3Q969T4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
UBE2E3Q969T4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBE2E3Q969T4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBE2E3Q969T4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
UBE2E3Q969T4 SNORD82-201ENST00000365530 70 ntBASIC3.12□□□□□ -1.91
UBE2E3Q969T4 RNU6-805P-201ENST00000365643 106 ntBASIC3.12□□□□□ -1.91
UBE2E3Q969T4 MIR217-201ENST00000384817 110 ntBASIC3.12□□□□□ -1.91
UBE2E3Q969T4 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
UBE2E3Q969T4 AL603865.2-201ENST00000401679 213 ntBASIC3.12□□□□□ -1.91
UBE2E3Q969T4 RPL7P27-201ENST00000403775 720 ntBASIC3.12□□□□□ -1.91
UBE2E3Q969T4 RNA5SP229-201ENST00000410809 99 ntBASIC3.12□□□□□ -1.91
UBE2E3Q969T4 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.12□□□□□ -1.91
UBE2E3Q969T4 BX323014.1-201ENST00000412876 237 ntBASIC3.12□□□□□ -1.91
UBE2E3Q969T4 RPS7P13-201ENST00000413955 498 ntBASIC3.12□□□□□ -1.91
UBE2E3Q969T4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.12□□□□□ -1.91
UBE2E3Q969T4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.12□□□□□ -1.91
UBE2E3Q969T4 Z93242.1-201ENST00000427102 353 ntBASIC3.12□□□□□ -1.91
UBE2E3Q969T4 AC092634.2-201ENST00000428146 1010 ntBASIC3.12□□□□□ -1.91
UBE2E3Q969T4 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms