Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 VN1R79P-201ENST00000593540 513 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 AL161729.4-201ENST00000604650 476 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 AP002360.4-201ENST00000606980 481 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 AL161616.1-201ENST00000611867 286 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 MIR6780A-201ENST00000615089 68 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 AC022306.2-201ENST00000617563 647 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 CYP3A51P-201ENST00000633513 256 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 AP002001.2-201ENST00000529025 1469 ntBASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
ATG4AQ8WYN0 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ATG4AQ8WYN0 AC007529.1-201ENST00000418574 2178 ntBASIC4.4□□□□□ -1.7
ATG4AQ8WYN0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.4□□□□□ -1.7
ATG4AQ8WYN0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.4□□□□□ -1.7
ATG4AQ8WYN0 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
ATG4AQ8WYN0 OR4K15-201ENST00000305051 1216 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 MIR181A1-201ENST00000385026 110 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 SNORD115.1-201ENST00000391109 76 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 RPL17P50-201ENST00000396131 546 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 AL139415.2-201ENST00000431968 163 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 AL353597.2-202ENST00000434901 373 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 RBMX2P4-201ENST00000441256 376 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 MTND6P13-201ENST00000443510 523 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 PTMAP3-201ENST00000447474 330 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 FGF7P6-202ENST00000451282 293 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 PABPC1P3-201ENST00000469174 459 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 RN7SL585P-201ENST00000470538 280 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 AC010683.1-201ENST00000473673 378 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 HMGB1P36-201ENST00000487709 576 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 OR51K1P-201ENST00000510214 950 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 RNA5SP228-201ENST00000516232 133 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 RNU6-1003P-201ENST00000517099 105 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 AP003467.2-201ENST00000520175 319 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 OR5D15P-201ENST00000531671 942 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 AP006289.1-201ENST00000538089 277 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 RPL21P5-201ENST00000554662 472 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 AL139395.1-201ENST00000603662 160 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 AC091965.4-201ENST00000607691 587 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 AC009237.17-201ENST00000618111 748 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 AC073534.2-201ENST00000620377 381 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 AC000123.2-201ENST00000623124 461 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 AC008785.1-201ENST00000624475 456 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 AC107027.3-201ENST00000565095 3473 ntBASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ATG4AQ8WYN0 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 GLRXP1-201ENST00000423261 334 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 AC007742.1-201ENST00000425789 329 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 ELOCP26-201ENST00000436067 329 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 RPL23AP89-201ENST00000439324 255 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 MTATP6P23-201ENST00000440153 476 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 AC069285.2-201ENST00000440210 275 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 AC003071.1-201ENST00000451219 789 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 RPS3AP17-201ENST00000472594 777 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 AC006517.1-201ENST00000480485 328 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 PGBD4P4-201ENST00000509673 613 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 AC110792.2-201ENST00000510278 224 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms