Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM41Q8WV44 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
TRIM41Q8WV44 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
TRIM41Q8WV44 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM41Q8WV44 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM41Q8WV44 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM41Q8WV44 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC9.07□□□□□ -0.96
TRIM41Q8WV44 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC9.07□□□□□ -0.96
TRIM41Q8WV44 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM41Q8WV44 RNU6-522P-201ENST00000364497 107 ntBASIC9.07□□□□□ -0.96
TRIM41Q8WV44 Y_RNA.367-201ENST00000365544 101 ntBASIC9.07□□□□□ -0.96
TRIM41Q8WV44 AL590609.2-201ENST00000421430 368 ntBASIC9.07□□□□□ -0.96
TRIM41Q8WV44 AC073465.2-201ENST00000440938 498 ntBASIC9.07□□□□□ -0.96
TRIM41Q8WV44 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC9.07□□□□□ -0.96
TRIM41Q8WV44 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC9.07□□□□□ -0.96
TRIM41Q8WV44 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM41Q8WV44 RPS29P15-201ENST00000458329 171 ntBASIC9.07□□□□□ -0.96
TRIM41Q8WV44 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
TRIM41Q8WV44 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM41Q8WV44 RNU6-1038P-201ENST00000516516 104 ntBASIC9.07□□□□□ -0.96
TRIM41Q8WV44 SCARNA20.4-201ENST00000516969 131 ntBASIC9.07□□□□□ -0.96
TRIM41Q8WV44 MYL12AP1-201ENST00000518490 515 ntBASIC9.07□□□□□ -0.96
TRIM41Q8WV44 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC9.07□□□□□ -0.96
TRIM41Q8WV44 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC9.07□□□□□ -0.96
TRIM41Q8WV44 MTCO3P23-201ENST00000561363 289 ntBASIC9.07□□□□□ -0.96
TRIM41Q8WV44 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM41Q8WV44 OR6R2P-201ENST00000609216 300 ntBASIC9.07□□□□□ -0.96
TRIM41Q8WV44 AL157817.1-201ENST00000614264 790 ntBASIC9.07□□□□□ -0.96
TRIM41Q8WV44 AC004696.1-201ENST00000614345 607 ntBASIC9.07□□□□□ -0.96
TRIM41Q8WV44 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM41Q8WV44 CDC27P3-201ENST00000635418 1910 ntBASIC9.07□□□□□ -0.96
TRIM41Q8WV44 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM41Q8WV44 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC9.07□□□□□ -0.96
TRIM41Q8WV44 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
TRIM41Q8WV44 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
TRIM41Q8WV44 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TRIM41Q8WV44 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TRIM41Q8WV44 RNU6-1032P-201ENST00000384100 107 ntBASIC9.06□□□□□ -0.96
TRIM41Q8WV44 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC9.06□□□□□ -0.96
TRIM41Q8WV44 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC9.06□□□□□ -0.96
TRIM41Q8WV44 NDUFB4P8-201ENST00000435351 367 ntBASIC9.06□□□□□ -0.96
TRIM41Q8WV44 AL031663.1-201ENST00000437445 219 ntBASIC9.06□□□□□ -0.96
TRIM41Q8WV44 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC9.06□□□□□ -0.96
TRIM41Q8WV44 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC9.06□□□□□ -0.96
TRIM41Q8WV44 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC9.06□□□□□ -0.96
TRIM41Q8WV44 AC006499.6-201ENST00000511169 607 ntBASIC9.06□□□□□ -0.96
TRIM41Q8WV44 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC9.06□□□□□ -0.96
TRIM41Q8WV44 AP000763.2-201ENST00000540641 163 ntBASIC9.06□□□□□ -0.96
TRIM41Q8WV44 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TRIM41Q8WV44 ALG13-230ENST00000623189 458 ntTSL 3 BASIC9.06□□□□□ -0.96
TRIM41Q8WV44 CDRT1-208ENST00000630868 794 ntBASIC9.06□□□□□ -0.96
TRIM41Q8WV44 AC000095.2-202ENST00000637415 154 ntBASIC9.06□□□□□ -0.96
TRIM41Q8WV44 TCP11X1-202ENST00000622971 1372 ntBASIC9.06□□□□□ -0.96
TRIM41Q8WV44 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC9.06□□□□□ -0.96
TRIM41Q8WV44 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
TRIM41Q8WV44 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TRIM41Q8WV44 AC100757.1-201ENST00000616872 1835 ntBASIC9.05□□□□□ -0.96
TRIM41Q8WV44 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
TRIM41Q8WV44 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
TRIM41Q8WV44 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TRIM41Q8WV44 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TRIM41Q8WV44 AL121950.1-201ENST00000624993 2077 ntBASIC9.05□□□□□ -0.96
TRIM41Q8WV44 Y_RNA.364-201ENST00000365532 101 ntBASIC9.05□□□□□ -0.96
TRIM41Q8WV44 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
TRIM41Q8WV44 DEFB109C-201ENST00000382575 264 ntBASIC9.05□□□□□ -0.96
TRIM41Q8WV44 DEFB109B-201ENST00000382656 264 ntBASIC9.05□□□□□ -0.96
TRIM41Q8WV44 RNU6-444P-201ENST00000383988 108 ntBASIC9.05□□□□□ -0.96
TRIM41Q8WV44 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
TRIM41Q8WV44 PPIAP9-201ENST00000403866 498 ntBASIC9.05□□□□□ -0.96
TRIM41Q8WV44 GJA6P-201ENST00000415117 1042 ntBASIC9.05□□□□□ -0.96
TRIM41Q8WV44 RPS26P40-201ENST00000435209 294 ntBASIC9.05□□□□□ -0.96
TRIM41Q8WV44 RPL36AP15-201ENST00000444514 266 ntBASIC9.05□□□□□ -0.96
TRIM41Q8WV44 AL035551.1-201ENST00000446931 348 ntBASIC9.05□□□□□ -0.96
TRIM41Q8WV44 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC9.05□□□□□ -0.96
TRIM41Q8WV44 AC104634.1-201ENST00000452720 462 ntBASIC9.05□□□□□ -0.96
TRIM41Q8WV44 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC9.05□□□□□ -0.96
TRIM41Q8WV44 RPS26P24-201ENST00000497656 331 ntBASIC9.05□□□□□ -0.96
TRIM41Q8WV44 AK3P4-201ENST00000504283 583 ntBASIC9.05□□□□□ -0.96
TRIM41Q8WV44 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC9.05□□□□□ -0.96
TRIM41Q8WV44 AC009812.2-201ENST00000517657 457 ntBASIC9.05□□□□□ -0.96
TRIM41Q8WV44 AP000889.2-201ENST00000532684 490 ntBASIC9.05□□□□□ -0.96
TRIM41Q8WV44 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC9.05□□□□□ -0.96
TRIM41Q8WV44 RN7SL356P-201ENST00000582228 248 ntBASIC9.05□□□□□ -0.96
TRIM41Q8WV44 AC007485.1-201ENST00000616755 206 ntBASIC9.05□□□□□ -0.96
TRIM41Q8WV44 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC9.05□□□□□ -0.96
TRIM41Q8WV44 AC015799.1-201ENST00000622996 3122 ntBASIC9.05□□□□□ -0.96
TRIM41Q8WV44 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
TRIM41Q8WV44 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
TRIM41Q8WV44 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
TRIM41Q8WV44 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TRIM41Q8WV44 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TRIM41Q8WV44 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
TRIM41Q8WV44 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC9.04□□□□□ -0.96
TRIM41Q8WV44 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
TRIM41Q8WV44 Y_RNA.257-201ENST00000364596 102 ntBASIC9.04□□□□□ -0.96
TRIM41Q8WV44 Y_RNA.574-201ENST00000384766 95 ntBASIC9.04□□□□□ -0.96
TRIM41Q8WV44 EIF5P1-201ENST00000400019 1231 ntBASIC9.04□□□□□ -0.96
TRIM41Q8WV44 AL136131.1-201ENST00000406079 803 ntBASIC9.04□□□□□ -0.96
TRIM41Q8WV44 AC093655.2-201ENST00000425735 631 ntBASIC9.04□□□□□ -0.96
TRIM41Q8WV44 ATP6V0E1P2-201ENST00000441771 245 ntBASIC9.04□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms