Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 MIR421-201ENST00000365696 85 ntBASIC2.78□□□□□ -1.97
SHROOM3Q8TF72 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.97
SHROOM3Q8TF72 RPL26P37-201ENST00000411983 438 ntBASIC2.78□□□□□ -1.97
SHROOM3Q8TF72 USP9YP19-201ENST00000412165 485 ntBASIC2.78□□□□□ -1.97
SHROOM3Q8TF72 AC063976.3-201ENST00000426849 329 ntBASIC2.78□□□□□ -1.97
SHROOM3Q8TF72 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
SHROOM3Q8TF72 AL139415.2-201ENST00000431968 163 ntBASIC2.78□□□□□ -1.97
SHROOM3Q8TF72 AL513328.1-201ENST00000446460 224 ntBASIC2.78□□□□□ -1.97
SHROOM3Q8TF72 RPL23AP23-201ENST00000452590 471 ntBASIC2.78□□□□□ -1.97
SHROOM3Q8TF72 RPL5P13-201ENST00000462840 709 ntBASIC2.78□□□□□ -1.97
SHROOM3Q8TF72 LARP7P4-201ENST00000481075 878 ntBASIC2.78□□□□□ -1.97
SHROOM3Q8TF72 AP001025.2-201ENST00000490908 477 ntBASIC2.78□□□□□ -1.97
SHROOM3Q8TF72 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.78□□□□□ -1.97
SHROOM3Q8TF72 AC008628.1-201ENST00000508663 265 ntBASIC2.78□□□□□ -1.97
SHROOM3Q8TF72 MTND2P7-201ENST00000521337 640 ntBASIC2.78□□□□□ -1.97
SHROOM3Q8TF72 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.78□□□□□ -1.97
SHROOM3Q8TF72 FAM106CP-201ENST00000582212 507 ntBASIC2.78□□□□□ -1.97
SHROOM3Q8TF72 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.97
SHROOM3Q8TF72 MTND4P21-201ENST00000453886 1357 ntBASIC2.77□□□□□ -1.97
SHROOM3Q8TF72 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SHROOM3Q8TF72 AC105402.1-201ENST00000413336 545 ntBASIC2.77□□□□□ -1.97
SHROOM3Q8TF72 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SHROOM3Q8TF72 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC2.77□□□□□ -1.97
SHROOM3Q8TF72 HMGN2P3-201ENST00000433603 273 ntBASIC2.77□□□□□ -1.97
SHROOM3Q8TF72 HMGN2P5-201ENST00000436882 273 ntBASIC2.77□□□□□ -1.97
SHROOM3Q8TF72 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.77□□□□□ -1.97
SHROOM3Q8TF72 AL500527.1-201ENST00000448532 255 ntBASIC2.77□□□□□ -1.97
SHROOM3Q8TF72 HSPE1P6-201ENST00000479457 291 ntBASIC2.77□□□□□ -1.97
SHROOM3Q8TF72 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.77□□□□□ -1.97
SHROOM3Q8TF72 RNA5SP282-201ENST00000516355 108 ntBASIC2.77□□□□□ -1.97
SHROOM3Q8TF72 AC100870.1-201ENST00000522035 505 ntBASIC2.77□□□□□ -1.97
SHROOM3Q8TF72 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.77□□□□□ -1.97
SHROOM3Q8TF72 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
SHROOM3Q8TF72 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.77□□□□□ -1.97
SHROOM3Q8TF72 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.77□□□□□ -1.97
SHROOM3Q8TF72 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SHROOM3Q8TF72 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.77□□□□□ -1.97
SHROOM3Q8TF72 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
SHROOM3Q8TF72 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SHROOM3Q8TF72 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
SHROOM3Q8TF72 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 SNORA27.3-201ENST00000364937 134 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 SNORA51.4-201ENST00000364993 124 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 AL049610.1-201ENST00000423374 372 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 MTND4LP7-201ENST00000431728 294 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 AL513043.1-201ENST00000439124 535 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 HAUS1P3-201ENST00000523909 662 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 AP003122.3-201ENST00000526316 255 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 OR8L1P-201ENST00000534005 955 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 PDCD5P1-201ENST00000543528 309 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 AC107016.2-201ENST00000547968 190 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 SNORD39.2-201ENST00000579995 76 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 MIR4648-201ENST00000580107 72 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 KATNBL1P5-201ENST00000605015 517 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 AL139039.1-201ENST00000401900 692 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 AC244505.4-201ENST00000434905 287 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 SSXP5-201ENST00000443473 287 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 AL162388.1-201ENST00000450912 352 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 AC098583.1-201ENST00000480875 255 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 RNU6-991P-201ENST00000516168 107 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 SNORA70.14-201ENST00000516205 110 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 NPM1P35-201ENST00000533043 868 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 ATP5F1P7-201ENST00000567330 760 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 MIR3908-201ENST00000579798 126 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 MIR4635-201ENST00000583759 79 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 AC103798.2-201ENST00000624292 632 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 ZNF658B-202ENST00000615961 3375 ntBASIC2.76□□□□□ -1.97
SHROOM3Q8TF72 HSPA8P4-201ENST00000511877 1920 ntBASIC2.75□□□□□ -1.97
SHROOM3Q8TF72 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SHROOM3Q8TF72 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
SHROOM3Q8TF72 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.75□□□□□ -1.97
SHROOM3Q8TF72 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.75□□□□□ -1.97
SHROOM3Q8TF72 MIR592-201ENST00000384959 97 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms