Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 MIR448-201ENST00000362131 111 ntBASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 RNA5SP52-201ENST00000362448 134 ntBASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 RNU1-132P-201ENST00000364300 164 ntBASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 RNU6-744P-201ENST00000365557 107 ntBASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 RNU6-1316P-201ENST00000384242 108 ntBASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 SNORD51-201ENST00000384320 80 ntBASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 AL445669.1-201ENST00000426743 755 ntBASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 MTCYBP45-201ENST00000435243 565 ntBASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 HMGB1P15-201ENST00000453854 435 ntBASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 OR6K1P-201ENST00000456766 971 ntBASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 AC023424.2-201ENST00000493479 777 ntBASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 RNA5SP154-201ENST00000516193 111 ntBASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 EEF1B2P4-201ENST00000551398 348 ntBASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 AC024909.2-201ENST00000553035 286 ntBASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 AL354984.3-201ENST00000604803 325 ntBASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 AL591034.3-201ENST00000605511 685 ntBASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 AC025594.3-201ENST00000613068 790 ntBASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 U73479.1-201ENST00000618062 168 ntBASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 AC040168.1-201ENST00000623594 991 ntBASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.53□□□□□ -1.69
CCDC33Q8N5R6 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 AC125257.1-201ENST00000560400 2930 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 AC067945.1-201ENST00000342609 618 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 AL161781.1-201ENST00000354277 403 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 MIR383-201ENST00000362257 73 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 RNU4-91P-201ENST00000364778 135 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 RNU1-64P-201ENST00000365443 163 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 MIR134-201ENST00000385258 73 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 U8.14-201ENST00000390843 143 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 SNORA48.7-201ENST00000391302 135 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 RNA5SP317-201ENST00000410176 116 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 RNA5SP311-201ENST00000411290 116 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 AC109780.2-201ENST00000413467 845 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 UBTFL3-201ENST00000418934 1024 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 AC109583.1-201ENST00000432156 268 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 MRPS18BP2-201ENST00000434310 759 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 THAP5P1-201ENST00000439089 262 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 AC069285.2-201ENST00000440210 275 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 DHFRP3-201ENST00000455595 559 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 TPTE2P5-203ENST00000458118 728 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 snoU109.4-201ENST00000458953 143 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 RPS7P7-201ENST00000463499 571 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 AC010424.1-201ENST00000506336 297 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 AC108475.1-201ENST00000507880 950 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 RNA5SP315-201ENST00000516340 116 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 RNA5SP312-201ENST00000517068 116 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 RPL12P22-201ENST00000519073 490 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 IGHV3-32-201ENST00000519182 355 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 MIR4307-201ENST00000582802 84 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 AC083760.1-201ENST00000589621 670 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 AC073544.2-201ENST00000601155 540 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 AC012065.4-201ENST00000602445 679 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 AC113403.1-201ENST00000604910 193 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 AC067931.1-201ENST00000624190 671 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 RNA5SP196-201ENST00000625967 102 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms