Protein–RNA interactions for Protein: Q6ZSB3

LINC00299, Putative uncharacterized protein encoded by LINC00299, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299Q6ZSB3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 RNA5SP391-201ENST00000363456 119 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 RNU6-666P-201ENST00000363499 107 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 RNU1-85P-201ENST00000364127 164 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 MIR9-1-201ENST00000385198 89 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 U3.19-201ENST00000390893 196 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 RN7SKP27-201ENST00000410684 333 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 AC073264.1-201ENST00000411508 416 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 Z75741.2-201ENST00000417272 1167 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 RPS24P8-201ENST00000431490 402 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 HMGB1P45-201ENST00000435986 653 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 AL031663.1-201ENST00000437445 219 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 AC006994.1-201ENST00000438212 839 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 RPS24P13-201ENST00000442520 397 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 AL157827.1-201ENST00000447622 132 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 RPL7P52-201ENST00000449200 742 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 RPL23AP49-201ENST00000492925 468 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 GTF2IP9-201ENST00000502460 301 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 MTCO1P47-201ENST00000523889 1271 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 AC087373.1-201ENST00000524920 491 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 CR383656.6-201ENST00000550518 394 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 MIR5680-201ENST00000577577 84 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 VN1R78P-201ENST00000597393 564 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 MTCO2P22-201ENST00000603246 681 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 ZYXP1-201ENST00000617638 118 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 RPL23AP61-201ENST00000623642 466 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 AC090897.3-201ENST00000636973 1157 ntBASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.13□□□□□ -2.07
LINC00299Q6ZSB3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 RNU6-1027P-201ENST00000383998 107 ntBASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 RPS3AP26-201ENST00000398259 784 ntBASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 AC109780.2-201ENST00000413467 845 ntBASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 RPL21P112-201ENST00000434403 463 ntBASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 PRDX3P3-201ENST00000447765 522 ntBASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 MTND2P8-201ENST00000450555 1025 ntBASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 AC108734.3-201ENST00000481241 1165 ntBASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 RPL23AP55-201ENST00000498163 452 ntBASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 RNU4-60P-201ENST00000517239 135 ntBASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 SNORD53-201ENST00000579969 78 ntBASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 AC112230.1-201ENST00000604342 547 ntBASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 AC090525.3-201ENST00000605601 189 ntBASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 RNA5SP108-201ENST00000605921 117 ntBASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 AC006023.2-201ENST00000609916 167 ntBASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 AC098657.3-201ENST00000620434 263 ntBASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 MIR7641-1-201ENST00000627518 61 ntBASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
LINC00299Q6ZSB3 AC024341.1-201ENST00000526444 1552 ntBASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 AL512646.1-201ENST00000269395 1077 ntBASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 RNU1-51P-201ENST00000365345 176 ntBASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 MIR490-201ENST00000384865 128 ntBASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 SDR42E1P3-201ENST00000438345 502 ntBASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 TRIM60P9Y-201ENST00000438459 816 ntBASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 TRIM60P11Y-201ENST00000445313 801 ntBASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 RPL36AP51-201ENST00000487216 318 ntBASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 RNU6-1308P-201ENST00000516817 103 ntBASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 VN1R85P-201ENST00000601587 426 ntBASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 AL606834.2-201ENST00000602954 668 ntBASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 AC104785.1-201ENST00000603220 588 ntBASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 AC112503.1-201ENST00000608436 391 ntBASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 AC006338.2-201ENST00000616864 791 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms