Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 RNU6-232P-201ENST00000517144 64 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AC008802.1-201ENST00000519121 791 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 SUMO2P20-201ENST00000520803 283 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AC087373.1-201ENST00000524920 491 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 DEFB131D-201ENST00000526803 184 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AC092851.1-201ENST00000535964 478 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AL161713.1-201ENST00000555538 145 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AC020914.6-201ENST00000594327 272 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AC020914.4-201ENST00000597690 277 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 VN1R85P-201ENST00000601587 426 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AP000811.1-201ENST00000603803 651 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AC121247.2-201ENST00000604776 136 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AC110741.2-201ENST00000605278 268 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AC093783.1-201ENST00000612976 329 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AC018816.2-201ENST00000621460 353 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 OR8B1P-202ENST00000641132 1178 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AC130650.2-201ENST00000618736 2403 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 RNU6-553P-201ENST00000364047 96 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 RNU1-85P-201ENST00000364127 164 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 RNA5SP515-201ENST00000364570 118 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 SNORA51.6-201ENST00000384151 125 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 MIR30B-201ENST00000384850 88 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 AL023807.1-201ENST00000407932 359 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 AC069218.2-201ENST00000411665 344 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 AMD1P2-201ENST00000412936 992 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 Z74696.2-201ENST00000436514 498 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 RPL39P6-201ENST00000448289 150 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 AC010301.1-201ENST00000473936 355 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 NCOR1P1-202ENST00000486162 291 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 RPF2P2-201ENST00000504693 896 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 AC005178.1-201ENST00000508392 440 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 OR5BM1P-201ENST00000512021 366 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 AC005798.1-201ENST00000513715 387 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 AL356057.1-201ENST00000533798 831 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 OR7K1P-201ENST00000546439 926 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 LSM6P2-201ENST00000552208 177 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 CYCSP2-201ENST00000558168 301 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 HSPE1P3-201ENST00000559254 309 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 Z99497.2-201ENST00000603634 310 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 AC024941.1-201ENST00000612250 334 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 C2orf27A-204ENST00000623058 969 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 FP236240.3-201ENST00000623061 327 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 AC092184.1-201ENST00000625042 715 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 AC027287.1-201ENST00000553115 1453 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 AC066616.2-201ENST00000559334 1481 ntBASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE3Q6ZMZ3 NCAPGP1-201ENST00000505112 1814 ntBASIC4.46□□□□□ -1.69
SYNE3Q6ZMZ3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
SYNE3Q6ZMZ3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.46□□□□□ -1.69
SYNE3Q6ZMZ3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.46□□□□□ -1.69
SYNE3Q6ZMZ3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 AL079343.1-201ENST00000572358 1771 ntBASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 RNU6-500P-201ENST00000362349 107 ntBASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 RNA5SP322-201ENST00000363617 119 ntBASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 AL953862.1-201ENST00000423016 168 ntBASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 AC008065.1-201ENST00000428525 348 ntBASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 AL035407.1-201ENST00000429211 571 ntBASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 AL591503.2-201ENST00000442314 1005 ntBASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 AL122001.1-201ENST00000457027 370 ntBASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 RNU7-125P-201ENST00000458760 62 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms