Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 RNU6-482P-201ENST00000391068 107 ntBASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 SETP10-201ENST00000424368 814 ntBASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 AL390023.1-201ENST00000428836 262 ntBASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 SNORA9.3-201ENST00000516383 129 ntBASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 AC026464.5-201ENST00000562497 722 ntBASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 Y_RNA.164-201ENST00000363709 102 ntBASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 AL020991.1-201ENST00000612314 373 ntBASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 NSRP1P1-201ENST00000444067 1693 ntBASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 AL512633.1-201ENST00000399931 655 ntBASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 MTCO3P31-201ENST00000405526 789 ntBASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 PTP4A1P7-201ENST00000423476 514 ntBASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 AC091917.2-201ENST00000505002 744 ntBASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 CR589904.2-201ENST00000612533 440 ntBASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 AL133412.1-201ENST00000380194 2992 ntBASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 AL356320.1-201ENST00000429616 163 ntBASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 AL024509.2-201ENST00000493462 493 ntBASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 AC025260.1-201ENST00000548858 430 ntBASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 AC008126.1-201ENST00000549019 480 ntBASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 AC128657.1-201ENST00000549459 145 ntBASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 AC091564.4-201ENST00000533934 2194 ntBASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 Y_RNA.140-201ENST00000363474 103 ntBASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 AL135786.1-201ENST00000415892 214 ntBASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 AL445646.1-201ENST00000431784 216 ntBASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 AL353997.5-201ENST00000618886 171 ntBASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 MIR6715B-201ENST00000637172 77 ntBASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 RNU2-6P-201ENST00000411404 190 ntBASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 AC007064.1-201ENST00000412238 351 ntBASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 RPS20P25-201ENST00000412447 352 ntBASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 RPL23AP36-201ENST00000413895 458 ntBASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 AL590399.6-201ENST00000446396 307 ntBASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 NPM1P49-201ENST00000448027 714 ntBASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 AC245517.4-201ENST00000448601 281 ntBASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 FAM92A1P2-202ENST00000504766 877 ntBASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC1.6□□□□□ -2.15
VPS13DQ5THJ4 MIR7-2-201ENST00000384970 110 ntBASIC1.59□□□□□ -2.15
VPS13DQ5THJ4 FAT1P1-201ENST00000406588 507 ntBASIC1.59□□□□□ -2.15
VPS13DQ5THJ4 AL662791.1-201ENST00000441992 928 ntBASIC1.59□□□□□ -2.15
VPS13DQ5THJ4 AC021733.2-201ENST00000518830 497 ntBASIC1.59□□□□□ -2.15
VPS13DQ5THJ4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC1.59□□□□□ -2.15
VPS13DQ5THJ4 BMS1P7-201ENST00000602440 1052 ntBASIC1.59□□□□□ -2.15
VPS13DQ5THJ4 AC093673.2-201ENST00000609674 331 ntBASIC1.59□□□□□ -2.15
VPS13DQ5THJ4 AL162233.1-201ENST00000620014 944 ntBASIC1.59□□□□□ -2.15
VPS13DQ5THJ4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.15
VPS13DQ5THJ4 AC093775.1-201ENST00000624154 1868 ntBASIC1.59□□□□□ -2.15
VPS13DQ5THJ4 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.59□□□□□ -2.15
VPS13DQ5THJ4 RPL31P1-201ENST00000398116 372 ntBASIC1.59□□□□□ -2.15
VPS13DQ5THJ4 NPM1P10-201ENST00000398310 865 ntBASIC1.59□□□□□ -2.15
VPS13DQ5THJ4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC1.59□□□□□ -2.15
VPS13DQ5THJ4 MIR4498-201ENST00000577599 66 ntBASIC1.59□□□□□ -2.15
VPS13DQ5THJ4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.59□□□□□ -2.15
VPS13DQ5THJ4 AL627309.6-201ENST00000606857 840 ntBASIC1.59□□□□□ -2.15
VPS13DQ5THJ4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.59□□□□□ -2.15
VPS13DQ5THJ4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.59□□□□□ -2.15
VPS13DQ5THJ4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.16
VPS13DQ5THJ4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
VPS13DQ5THJ4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC1.59□□□□□ -2.16
VPS13DQ5THJ4 AL450263.2-201ENST00000439400 589 ntBASIC1.59□□□□□ -2.16
VPS13DQ5THJ4 MTND6P18-201ENST00000439477 513 ntBASIC1.59□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms