Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.01□□□□□ -1.93
RFX4Q33E94 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
RFX4Q33E94 AC104619.4-201ENST00000510773 249 ntBASIC3.01□□□□□ -1.93
RFX4Q33E94 APOOP4-201ENST00000513530 597 ntBASIC3.01□□□□□ -1.93
RFX4Q33E94 IGKV2-26-201ENST00000518305 343 ntBASIC3.01□□□□□ -1.93
RFX4Q33E94 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.01□□□□□ -1.93
RFX4Q33E94 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.01□□□□□ -1.93
RFX4Q33E94 AP003102.1-201ENST00000525638 661 ntBASIC3.01□□□□□ -1.93
RFX4Q33E94 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.01□□□□□ -1.93
RFX4Q33E94 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.01□□□□□ -1.93
RFX4Q33E94 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.01□□□□□ -1.93
RFX4Q33E94 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
RFX4Q33E94 AC093227.2-201ENST00000589357 285 ntBASIC3.01□□□□□ -1.93
RFX4Q33E94 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.01□□□□□ -1.93
RFX4Q33E94 AC002487.1-201ENST00000604565 994 ntBASIC3.01□□□□□ -1.93
RFX4Q33E94 AL512427.1-201ENST00000618593 349 ntBASIC3.01□□□□□ -1.93
RFX4Q33E94 AC127502.3-201ENST00000636170 1206 ntBASIC3.01□□□□□ -1.93
RFX4Q33E94 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.01□□□□□ -1.93
RFX4Q33E94 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RFX4Q33E94 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
RFX4Q33E94 AL161912.2-201ENST00000565707 3007 ntBASIC3.01□□□□□ -1.93
RFX4Q33E94 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3□□□□□ -1.93
RFX4Q33E94 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RFX4Q33E94 AC110774.1-201ENST00000623567 2018 ntBASIC3□□□□□ -1.93
RFX4Q33E94 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3□□□□□ -1.93
RFX4Q33E94 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
RFX4Q33E94 RNA5SP197-201ENST00000363357 119 ntBASIC3□□□□□ -1.93
RFX4Q33E94 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3□□□□□ -1.93
RFX4Q33E94 RNU6-549P-201ENST00000384433 107 ntBASIC3□□□□□ -1.93
RFX4Q33E94 UBE2V1P9-201ENST00000414760 368 ntBASIC3□□□□□ -1.93
RFX4Q33E94 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3□□□□□ -1.93
RFX4Q33E94 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3□□□□□ -1.93
RFX4Q33E94 AC092017.2-201ENST00000427600 362 ntBASIC3□□□□□ -1.93
RFX4Q33E94 ARF4P4-201ENST00000439608 520 ntBASIC3□□□□□ -1.93
RFX4Q33E94 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3□□□□□ -1.93
RFX4Q33E94 NDUFAF4P2-201ENST00000445374 520 ntBASIC3□□□□□ -1.93
RFX4Q33E94 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3□□□□□ -1.93
RFX4Q33E94 RPL7P15-201ENST00000461190 712 ntBASIC3□□□□□ -1.93
RFX4Q33E94 PLGLA-201ENST00000465668 449 ntBASIC3□□□□□ -1.93
RFX4Q33E94 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3□□□□□ -1.93
RFX4Q33E94 AC087879.1-201ENST00000474343 374 ntBASIC3□□□□□ -1.93
RFX4Q33E94 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3□□□□□ -1.93
RFX4Q33E94 AC025518.1-201ENST00000479856 347 ntBASIC3□□□□□ -1.93
RFX4Q33E94 AC106707.2-201ENST00000484182 374 ntBASIC3□□□□□ -1.93
RFX4Q33E94 AC093663.1-201ENST00000497190 394 ntBASIC3□□□□□ -1.93
RFX4Q33E94 AC026414.1-201ENST00000504046 698 ntBASIC3□□□□□ -1.93
RFX4Q33E94 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3□□□□□ -1.93
RFX4Q33E94 AC069306.1-201ENST00000507006 843 ntBASIC3□□□□□ -1.93
RFX4Q33E94 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3□□□□□ -1.93
RFX4Q33E94 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3□□□□□ -1.93
RFX4Q33E94 AC109471.1-201ENST00000511631 612 ntBASIC3□□□□□ -1.93
RFX4Q33E94 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3□□□□□ -1.93
RFX4Q33E94 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3□□□□□ -1.93
RFX4Q33E94 NACA-211ENST00000548563 827 ntTSL 5 BASIC3□□□□□ -1.93
RFX4Q33E94 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3□□□□□ -1.93
RFX4Q33E94 AC126365.2-201ENST00000580630 379 ntBASIC3□□□□□ -1.93
RFX4Q33E94 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3□□□□□ -1.93
RFX4Q33E94 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3□□□□□ -1.93
RFX4Q33E94 RPAP2P1-201ENST00000603626 1168 ntBASIC3□□□□□ -1.93
RFX4Q33E94 AC005014.3-201ENST00000605985 190 ntBASIC3□□□□□ -1.93
RFX4Q33E94 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3□□□□□ -1.93
RFX4Q33E94 AL138960.2-201ENST00000625145 535 ntBASIC3□□□□□ -1.93
RFX4Q33E94 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3□□□□□ -1.93
RFX4Q33E94 AC009093.8-201ENST00000641769 292 ntBASIC3□□□□□ -1.93
RFX4Q33E94 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3□□□□□ -1.93
RFX4Q33E94 AC002546.1-201ENST00000588041 2504 ntBASIC3□□□□□ -1.93
RFX4Q33E94 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RFX4Q33E94 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3□□□□□ -1.93
RFX4Q33E94 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3□□□□□ -1.93
RFX4Q33E94 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
RFX4Q33E94 AC111188.2-201ENST00000529697 1387 ntBASIC3□□□□□ -1.93
RFX4Q33E94 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RFX4Q33E94 AP001350.1-201ENST00000601906 1524 ntBASIC2.99□□□□□ -1.93
RFX4Q33E94 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RFX4Q33E94 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.99□□□□□ -1.93
RFX4Q33E94 MIR554-201ENST00000384874 96 ntBASIC2.99□□□□□ -1.93
RFX4Q33E94 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RFX4Q33E94 RPL31P1-201ENST00000398116 372 ntBASIC2.99□□□□□ -1.93
RFX4Q33E94 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.99□□□□□ -1.93
RFX4Q33E94 RAB9AP3-201ENST00000412737 573 ntBASIC2.99□□□□□ -1.93
RFX4Q33E94 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.99□□□□□ -1.93
RFX4Q33E94 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.99□□□□□ -1.93
RFX4Q33E94 AC092634.2-201ENST00000428146 1010 ntBASIC2.99□□□□□ -1.93
RFX4Q33E94 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.99□□□□□ -1.93
RFX4Q33E94 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.99□□□□□ -1.93
RFX4Q33E94 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.99□□□□□ -1.93
RFX4Q33E94 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.99□□□□□ -1.93
RFX4Q33E94 AC073063.1-201ENST00000434352 607 ntBASIC2.99□□□□□ -1.93
RFX4Q33E94 ATP5C1P1-201ENST00000441945 895 ntBASIC2.99□□□□□ -1.93
RFX4Q33E94 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.99□□□□□ -1.93
RFX4Q33E94 RAB9AP1-201ENST00000449393 573 ntBASIC2.99□□□□□ -1.93
RFX4Q33E94 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.99□□□□□ -1.93
RFX4Q33E94 AC244505.3-201ENST00000454598 187 ntBASIC2.99□□□□□ -1.93
RFX4Q33E94 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.99□□□□□ -1.93
RFX4Q33E94 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.99□□□□□ -1.93
RFX4Q33E94 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.99□□□□□ -1.93
RFX4Q33E94 RNU1-45P-201ENST00000517191 141 ntBASIC2.99□□□□□ -1.93
RFX4Q33E94 PAICSP4-201ENST00000517543 1253 ntBASIC2.99□□□□□ -1.93
RFX4Q33E94 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.99□□□□□ -1.93
RFX4Q33E94 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms