Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 AC074029.4-201ENST00000624796 1859 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 AC010401.2-201ENST00000575137 4934 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 MIR411-201ENST00000362239 96 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 Y_RNA.8-201ENST00000362353 102 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 RNA5SP350-201ENST00000363298 111 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 RNU105B-201ENST00000364478 208 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 MRPL35P1-201ENST00000404272 572 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 Y_RNA.629-201ENST00000411368 105 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 CYP4F30P-202ENST00000420048 405 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 RPL7P37-201ENST00000425095 738 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 AL031584.1-201ENST00000447169 754 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 AC016027.4-201ENST00000450866 277 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 AL035090.1-201ENST00000454835 332 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 snoU13.29-201ENST00000459370 104 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 RN7SL57P-201ENST00000493687 290 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 AC097486.1-201ENST00000515331 210 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 HMGN2P36-201ENST00000529541 409 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 HMGN2P47-201ENST00000559378 272 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 AC022884.2-201ENST00000578535 580 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 AC068790.3-201ENST00000602988 553 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 AC244100.1-202ENST00000621554 382 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 U6.101-201ENST00000637707 76 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 BIN2P1-201ENST00000504996 1530 ntBASIC6.35□□□□□ -1.39
CTC1Q2NKJ3 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 MSL3P1-202ENST00000440028 1468 ntBASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 AC006484.1-201ENST00000435086 1884 ntBASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 RBPJP2-201ENST00000618187 1444 ntBASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 AC140479.2-201ENST00000421567 3130 ntBASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 SELENOWP1-201ENST00000322792 252 ntBASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 MIR335-201ENST00000362173 94 ntBASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 AL121835.1-201ENST00000404250 354 ntBASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 MIR1286-201ENST00000408112 78 ntBASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 RNU2-6P-201ENST00000411404 190 ntBASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 RPS15AP30-201ENST00000420976 390 ntBASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 RN7SL329P-201ENST00000467740 299 ntBASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 AC091021.1-201ENST00000468051 388 ntBASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 PABPC1P3-201ENST00000469174 459 ntBASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 AL049830.2-201ENST00000480072 201 ntBASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 AC108471.1-201ENST00000513977 287 ntBASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 RNU6-1332P-201ENST00000516666 104 ntBASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 AF279873.1-201ENST00000523393 313 ntBASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 DEFB108E-201ENST00000524692 240 ntBASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 AC091516.1-201ENST00000549191 703 ntBASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 AC141002.1-201ENST00000607025 279 ntBASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 MIR6748-201ENST00000610433 71 ntBASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 AL159153.1-201ENST00000619688 317 ntBASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
CTC1Q2NKJ3 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms