| PAX8 | Q06710 | MTCO3P11-201 | ENST00000455103 | 774 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | SCEL-AS1-201 | ENST00000456280 | 493 nt | TSL 3 BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC072039.1-201 | ENST00000477611 | 581 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | RAP1BP2-201 | ENST00000478270 | 544 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AP000926.1-201 | ENST00000479573 | 241 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC073359.1-201 | ENST00000486545 | 521 nt | TSL 2 BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AHI1-208 | ENST00000488690 | 712 nt | TSL 5 BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | SNX5P1-201 | ENST00000505757 | 1041 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | MTCYBP37-201 | ENST00000510642 | 1133 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | RNU6-583P-201 | ENST00000516012 | 92 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | SNORA67.7-201 | ENST00000516664 | 135 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | TBCA-206 | ENST00000518338 | 551 nt | TSL 2 BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC027801.4-201 | ENST00000518420 | 395 nt | TSL 5 BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC015468.3-201 | ENST00000518967 | 417 nt | TSL 2 BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC103952.1-201 | ENST00000521872 | 590 nt | TSL 3 BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC011363.1-201 | ENST00000524198 | 458 nt | TSL 5 BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC140847.1-201 | ENST00000538025 | 534 nt | TSL 4 BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | MRPL51-207 | ENST00000543959 | 472 nt | TSL 3 BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | MRPL42-203 | ENST00000547098 | 701 nt | TSL 3 BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AL450442.1-201 | ENST00000554042 | 854 nt | TSL 1 (best) BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | LINC01491-202 | ENST00000558792 | 439 nt | TSL 3 BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | DISC1FP1-201 | ENST00000561596 | 545 nt | TSL 5 BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | ROCK1P1-201 | ENST00000573767 | 549 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AP005271.1-201 | ENST00000582470 | 412 nt | TSL 3 BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | MIR3158-1-201 | ENST00000583596 | 81 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | LINC01539-206 | ENST00000593282 | 678 nt | TSL 4 BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AF131215.7-201 | ENST00000602443 | 707 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | HMGB1P50-201 | ENST00000605814 | 607 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC012603.1-201 | ENST00000606424 | 528 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC073114.1-201 | ENST00000612027 | 490 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC011939.3-201 | ENST00000613686 | 466 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC006133.1-201 | ENST00000617106 | 264 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AL139089.1-201 | ENST00000620372 | 975 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AL359715.5-201 | ENST00000623431 | 443 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | OR51G1-201 | ENST00000623849 | 966 nt | APPRIS P1 BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC092192.1-201 | ENST00000633154 | 1018 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | CAPZA2-215 | ENST00000639546 | 129 nt | TSL 5 BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | LINC02120-201 | ENST00000505518 | 2008 nt | TSL 1 (best) BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | LRRC77P-206 | ENST00000481578 | 2350 nt | TSL 1 (best) BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | CYP3A4-201 | ENST00000336411 | 2153 nt | APPRIS P1 TSL 1 (best) BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | MARK2P15-201 | ENST00000432204 | 2186 nt | BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | C8orf34-202 | ENST00000337103 | 3652 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | PNISR-201 | ENST00000369239 | 5112 nt | APPRIS P1 TSL 1 (best) BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | CCSER1-201 | ENST00000432775 | 3927 nt | TSL 1 (best) BASIC | 3.25 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | MTUS1-216 | ENST00000519263 | 4089 nt | TSL 2 BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | RGS13-201 | ENST00000391995 | 1505 nt | APPRIS P1 TSL 1 (best) BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AP002001.2-201 | ENST00000529025 | 1469 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | Y_RNA.18-201 | ENST00000362461 | 102 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | Y_RNA.77-201 | ENST00000362962 | 107 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | RNA5SP97-201 | ENST00000365006 | 84 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | MT-TH-201 | ENST00000387441 | 69 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | SNRPEP2-201 | ENST00000397592 | 279 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | PTMAP2-201 | ENST00000397627 | 327 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | RPS3AP26-201 | ENST00000398259 | 784 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | SNORA3C-201 | ENST00000408792 | 125 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | RNU2-21P-201 | ENST00000410368 | 188 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AL024509.3-201 | ENST00000413898 | 745 nt | TSL 1 (best) BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AL078581.1-201 | ENST00000419134 | 340 nt | TSL 5 BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | Z97055.1-201 | ENST00000419730 | 712 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | LINC01074-201 | ENST00000422527 | 555 nt | TSL 3 BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AL391219.1-201 | ENST00000422570 | 483 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | OFD1P12Y-201 | ENST00000427963 | 1207 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | MYCBP2-AS2-201 | ENST00000428716 | 428 nt | TSL 5 BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC244035.1-201 | ENST00000430042 | 390 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | FTH1P6-201 | ENST00000430768 | 320 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC010153.1-201 | ENST00000432862 | 727 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | MTCYBP39-201 | ENST00000437562 | 491 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC105402.2-201 | ENST00000438503 | 358 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AL117351.1-201 | ENST00000438864 | 766 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC092155.1-201 | ENST00000444672 | 573 nt | TSL 4 BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AL731568.1-201 | ENST00000445111 | 434 nt | TSL 2 BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AL157359.1-201 | ENST00000449840 | 424 nt | TSL 3 BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC009158.1-205 | ENST00000452511 | 895 nt | TSL 3 BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | ARPC3P2-201 | ENST00000457786 | 533 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | snoU13.7-201 | ENST00000459220 | 104 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | TIPARP-AS1-201 | ENST00000463449 | 735 nt | TSL 3 BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | RPS20P21-201 | ENST00000466859 | 343 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | PDCD10-214 | ENST00000487947 | 716 nt | TSL 5 BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AL024509.2-201 | ENST00000493462 | 493 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | RN7SL323P-201 | ENST00000494712 | 295 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC093864.1-201 | ENST00000504555 | 745 nt | TSL 5 BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC016687.2-201 | ENST00000504795 | 541 nt | TSL 5 BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | SLC25A15P5-201 | ENST00000508033 | 253 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC097467.3-213 | ENST00000508191 | 726 nt | TSL 3 BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | PAIP2-205 | ENST00000510080 | 858 nt | APPRIS P1 TSL 1 (best) BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC005699.1-201 | ENST00000510095 | 555 nt | TSL 3 BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC108210.1-201 | ENST00000510772 | 825 nt | TSL 3 BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | HTN1-204 | ENST00000511674 | 623 nt | APPRIS P1 TSL 2 BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC022790.1-201 | ENST00000522872 | 204 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | DEFB131D-201 | ENST00000526803 | 184 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AP002989.1-201 | ENST00000533459 | 562 nt | TSL 4 BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AP001360.2-201 | ENST00000534423 | 562 nt | TSL 4 BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | SOX9-AS1-214 | ENST00000540802 | 578 nt | TSL 4 BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | LINC01479-201 | ENST00000545520 | 509 nt | TSL 2 BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC007115.1-201 | ENST00000546853 | 234 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AL121766.1-201 | ENST00000547436 | 487 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AGGF1P8-201 | ENST00000562979 | 1000 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC074050.1-201 | ENST00000563247 | 211 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | ACTR3BP3-201 | ENST00000565577 | 979 nt | BASIC | 3.24 | □□□□□ -1.89 | | |
| PAX8 | Q06710 | AC007599.1-201 | ENST00000568688 | 1174 nt | BASIC | 3.24 | □□□□□ -1.89 | | |