Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
RPS28P62857 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
RPS28P62857 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.72□□□□□ -2.13
RPS28P62857 CENPCP1-201ENST00000533085 2578 ntBASIC1.72□□□□□ -2.13
RPS28P62857 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC1.72□□□□□ -2.13
RPS28P62857 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
RPS28P62857 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC1.72□□□□□ -2.13
RPS28P62857 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC1.72□□□□□ -2.13
RPS28P62857 MIR676-201ENST00000390702 67 ntBASIC1.72□□□□□ -2.13
RPS28P62857 YWHAZP6-201ENST00000399764 738 ntBASIC1.72□□□□□ -2.13
RPS28P62857 AL390774.1-201ENST00000411924 246 ntBASIC1.72□□□□□ -2.13
RPS28P62857 HSPE1P12-201ENST00000412576 301 ntBASIC1.72□□□□□ -2.13
RPS28P62857 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RPS28P62857 RPS7P9-201ENST00000414704 586 ntBASIC1.72□□□□□ -2.13
RPS28P62857 COX6CP17-201ENST00000421389 185 ntBASIC1.72□□□□□ -2.13
RPS28P62857 GTF2IP20-201ENST00000431663 360 ntBASIC1.72□□□□□ -2.13
RPS28P62857 MTND4LP10-201ENST00000435146 291 ntBASIC1.72□□□□□ -2.13
RPS28P62857 RPS3AP54-201ENST00000435535 734 ntBASIC1.72□□□□□ -2.13
RPS28P62857 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.72□□□□□ -2.13
RPS28P62857 Z80107.1-201ENST00000436830 412 ntBASIC1.72□□□□□ -2.13
RPS28P62857 AL714022.1-201ENST00000439897 151 ntBASIC1.72□□□□□ -2.13
RPS28P62857 SDCBPP1-201ENST00000440192 890 ntBASIC1.72□□□□□ -2.13
RPS28P62857 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.72□□□□□ -2.13
RPS28P62857 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC1.72□□□□□ -2.13
RPS28P62857 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC1.72□□□□□ -2.13
RPS28P62857 RN7SL172P-201ENST00000460535 303 ntBASIC1.72□□□□□ -2.13
RPS28P62857 AC090515.1-201ENST00000465295 476 ntBASIC1.72□□□□□ -2.13
RPS28P62857 AC072039.1-201ENST00000477611 581 ntBASIC1.72□□□□□ -2.13
RPS28P62857 AC116337.2-201ENST00000477662 156 ntBASIC1.72□□□□□ -2.13
RPS28P62857 AC126182.1-201ENST00000478134 357 ntBASIC1.72□□□□□ -2.13
RPS28P62857 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.72□□□□□ -2.13
RPS28P62857 KATNBL1P4-201ENST00000503545 918 ntBASIC1.72□□□□□ -2.13
RPS28P62857 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.72□□□□□ -2.13
RPS28P62857 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
RPS28P62857 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.72□□□□□ -2.13
RPS28P62857 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.72□□□□□ -2.13
RPS28P62857 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC1.72□□□□□ -2.13
RPS28P62857 AC022634.1-201ENST00000520765 532 ntBASIC1.72□□□□□ -2.13
RPS28P62857 AP005902.1-201ENST00000521358 186 ntBASIC1.72□□□□□ -2.13
RPS28P62857 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC1.72□□□□□ -2.13
RPS28P62857 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.72□□□□□ -2.13
RPS28P62857 OR5AQ1P-201ENST00000527596 927 ntBASIC1.72□□□□□ -2.13
RPS28P62857 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC1.72□□□□□ -2.13
RPS28P62857 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.72□□□□□ -2.13
RPS28P62857 GTF2IP22-201ENST00000554443 182 ntBASIC1.72□□□□□ -2.13
RPS28P62857 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC1.72□□□□□ -2.13
RPS28P62857 AC004232.2-201ENST00000574245 821 ntBASIC1.72□□□□□ -2.13
RPS28P62857 AC022069.1-201ENST00000582910 658 ntBASIC1.72□□□□□ -2.13
RPS28P62857 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC1.72□□□□□ -2.13
RPS28P62857 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC1.72□□□□□ -2.13
RPS28P62857 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.72□□□□□ -2.13
RPS28P62857 AL022099.1-201ENST00000604551 712 ntBASIC1.72□□□□□ -2.13
RPS28P62857 AC025588.2-201ENST00000604851 466 ntBASIC1.72□□□□□ -2.13
RPS28P62857 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC1.72□□□□□ -2.13
RPS28P62857 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC1.72□□□□□ -2.13
RPS28P62857 AC211486.4-201ENST00000621495 113 ntBASIC1.72□□□□□ -2.13
RPS28P62857 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.72□□□□□ -2.13
RPS28P62857 AP003399.1-201ENST00000637534 361 ntBASIC1.72□□□□□ -2.13
RPS28P62857 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC1.72□□□□□ -2.13
RPS28P62857 POMP-202ENST00000460403 1428 ntTSL 3 BASIC1.72□□□□□ -2.13
RPS28P62857 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
RPS28P62857 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
RPS28P62857 AC073346.2-201ENST00000624724 2058 ntBASIC1.71□□□□□ -2.13
RPS28P62857 CCT4P2-201ENST00000233836 1548 ntBASIC1.71□□□□□ -2.14
RPS28P62857 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RPS28P62857 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
RPS28P62857 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RPS28P62857 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RPS28P62857 AC023490.2-201ENST00000359859 470 ntBASIC1.71□□□□□ -2.14
RPS28P62857 MIR331-201ENST00000362302 94 ntBASIC1.71□□□□□ -2.14
RPS28P62857 RNA5SP46-201ENST00000362370 120 ntBASIC1.71□□□□□ -2.14
RPS28P62857 RNU6-525P-201ENST00000363685 104 ntBASIC1.71□□□□□ -2.14
RPS28P62857 RNA5SP37-201ENST00000365420 130 ntBASIC1.71□□□□□ -2.14
RPS28P62857 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
RPS28P62857 RNA5SP122-201ENST00000384457 108 ntBASIC1.71□□□□□ -2.14
RPS28P62857 RNU6-1151P-201ENST00000384684 107 ntBASIC1.71□□□□□ -2.14
RPS28P62857 AL512633.1-201ENST00000399931 655 ntBASIC1.71□□□□□ -2.14
RPS28P62857 MIR1231-201ENST00000408101 92 ntBASIC1.71□□□□□ -2.14
RPS28P62857 RNU6ATAC18P-201ENST00000408413 101 ntBASIC1.71□□□□□ -2.14
RPS28P62857 RNA5SP198-201ENST00000410376 127 ntBASIC1.71□□□□□ -2.14
RPS28P62857 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.71□□□□□ -2.14
RPS28P62857 RPS20P25-201ENST00000412447 352 ntBASIC1.71□□□□□ -2.14
RPS28P62857 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.71□□□□□ -2.14
RPS28P62857 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC1.71□□□□□ -2.14
RPS28P62857 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC1.71□□□□□ -2.14
RPS28P62857 AL390879.2-203ENST00000426943 1121 ntBASIC1.71□□□□□ -2.14
RPS28P62857 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC1.71□□□□□ -2.14
RPS28P62857 BX323845.3-201ENST00000428215 527 ntBASIC1.71□□□□□ -2.14
RPS28P62857 AC002504.1-201ENST00000438281 691 ntBASIC1.71□□□□□ -2.14
RPS28P62857 AL645931.1-201ENST00000439737 410 ntBASIC1.71□□□□□ -2.14
RPS28P62857 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.71□□□□□ -2.14
RPS28P62857 AL049820.1-201ENST00000442936 423 ntTSL 2 BASIC1.71□□□□□ -2.14
RPS28P62857 MRPL50P4-201ENST00000446432 475 ntBASIC1.71□□□□□ -2.14
RPS28P62857 AC092647.2-201ENST00000452998 253 ntBASIC1.71□□□□□ -2.14
RPS28P62857 RNU6-420P-201ENST00000458780 107 ntBASIC1.71□□□□□ -2.14
RPS28P62857 AC104164.3-201ENST00000467363 1258 ntBASIC1.71□□□□□ -2.14
RPS28P62857 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.71□□□□□ -2.14
RPS28P62857 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC1.71□□□□□ -2.14
RPS28P62857 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.71□□□□□ -2.14
RPS28P62857 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms