Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.16□□□□□ -1.58
HERVK_113P62684 RPL7P22-201ENST00000466005 733 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HERVK_113P62684 RPS3AP14-201ENST00000483907 780 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 MTND1P3-201ENST00000484956 952 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 AC009646.1-201ENST00000510455 318 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 AC024589.1-201ENST00000512207 263 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 Y_RNA.702-201ENST00000516843 96 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 OR5AQ1P-201ENST00000527596 927 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HERVK_113P62684 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.16□□□□□ -1.58
HERVK_113P62684 AL390334.1-201ENST00000556395 450 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 AL157394.1-201ENST00000562983 1224 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 MIR3682-201ENST00000581338 84 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 DUXAP4-201ENST00000603046 613 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 BCRP9-201ENST00000605312 388 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 AL122125.1-201ENST00000616999 600 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 uc_338.13-201ENST00000618243 179 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.16□□□□□ -1.58
HERVK_113P62684 AC104985.2-201ENST00000620598 500 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 AL359880.1-201ENST00000621879 266 ntBASIC5.16□□□□□ -1.58
HERVK_113P62684 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.16□□□□□ -1.58
HERVK_113P62684 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.16□□□□□ -1.58
HERVK_113P62684 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HERVK_113P62684 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HERVK_113P62684 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HERVK_113P62684 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HERVK_113P62684 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
HERVK_113P62684 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HERVK_113P62684 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
HERVK_113P62684 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HERVK_113P62684 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HERVK_113P62684 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.15□□□□□ -1.59
HERVK_113P62684 RN7SKP280-201ENST00000364196 304 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 RNU6-780P-201ENST00000391030 104 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 AL080315.1-201ENST00000406055 466 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 AC009302.1-201ENST00000417147 390 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 AL139413.1-201ENST00000421309 217 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 RPL23AP38-201ENST00000423801 469 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.15□□□□□ -1.59
HERVK_113P62684 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 NANOGP6-201ENST00000429190 847 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 AC073464.1-201ENST00000429823 534 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 MTND3P23-201ENST00000431980 347 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC5.15□□□□□ -1.59
HERVK_113P62684 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.15□□□□□ -1.59
HERVK_113P62684 AC104651.2-201ENST00000447549 528 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 ARPC3P5-201ENST00000448802 534 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.15□□□□□ -1.59
HERVK_113P62684 AC026410.2-201ENST00000460281 156 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 RN7SL809P-201ENST00000482040 297 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 RPL21P129-201ENST00000491732 478 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.15□□□□□ -1.59
HERVK_113P62684 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.15□□□□□ -1.59
HERVK_113P62684 AC104986.1-201ENST00000517978 436 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.15□□□□□ -1.59
HERVK_113P62684 AP003467.2-201ENST00000520175 319 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5.15□□□□□ -1.59
HERVK_113P62684 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.15□□□□□ -1.59
HERVK_113P62684 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.15□□□□□ -1.59
HERVK_113P62684 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.15□□□□□ -1.59
HERVK_113P62684 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.15□□□□□ -1.59
HERVK_113P62684 AC034105.4-201ENST00000568304 277 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 AC015912.2-201ENST00000571053 181 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 LARP7P2-201ENST00000575306 125 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 BBIP1P1-201ENST00000602999 279 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 COX6CP4-201ENST00000605798 228 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 SNX18P1Y-201ENST00000616231 511 ntBASIC5.15□□□□□ -1.59
HERVK_113P62684 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
HERVK_113P62684 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.15□□□□□ -1.59
HERVK_113P62684 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.15□□□□□ -1.59
HERVK_113P62684 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.15□□□□□ -1.59
HERVK_113P62684 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HERVK_113P62684 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HERVK_113P62684 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.14□□□□□ -1.59
HERVK_113P62684 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HERVK_113P62684 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HERVK_113P62684 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HERVK_113P62684 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
HERVK_113P62684 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HERVK_113P62684 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HERVK_113P62684 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
HERVK_113P62684 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HERVK_113P62684 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HERVK_113P62684 RNU6-1090P-201ENST00000364065 94 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.14□□□□□ -1.59
HERVK_113P62684 Y_RNA.402-201ENST00000383972 102 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 RNU6-441P-201ENST00000384545 106 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 MIR23B-201ENST00000384832 97 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 MIR195-201ENST00000385194 87 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 EIF5P1-201ENST00000400019 1231 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 MTND4LP20-201ENST00000402379 270 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 AL445189.1-201ENST00000405722 338 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HERVK_113P62684 AC009961.2-201ENST00000435771 251 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms