Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 ZNF652P1-201ENST00000442420 1309 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ERVFC1P60507 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
ERVFC1P60507 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ERVFC1P60507 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ERVFC1P60507 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ERVFC1P60507 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ERVFC1P60507 NACAP2-201ENST00000318548 624 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 Y_RNA.255-201ENST00000364581 97 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 SNORA20.2-201ENST00000383922 131 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 RNA5SP187-201ENST00000384400 119 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 SNORA70.10-201ENST00000384515 134 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
ERVFC1P60507 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.28□□□□□ -1.56
ERVFC1P60507 RN7SKP106-201ENST00000410832 272 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 TPMTP2-201ENST00000414372 726 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 AC127526.1-201ENST00000417526 366 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.28□□□□□ -1.56
ERVFC1P60507 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.28□□□□□ -1.56
ERVFC1P60507 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.28□□□□□ -1.56
ERVFC1P60507 CACYBPP2-201ENST00000453625 678 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.28□□□□□ -1.56
ERVFC1P60507 AL356010.1-201ENST00000456364 102 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 RPL7P22-201ENST00000466005 733 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 EIF4EP3-201ENST00000498782 656 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 AK3P4-201ENST00000504283 583 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 TMEM248P1-201ENST00000510579 951 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 AC005741.1-201ENST00000511094 432 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.28□□□□□ -1.56
ERVFC1P60507 RN7SKP256-201ENST00000517201 314 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.28□□□□□ -1.56
ERVFC1P60507 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.28□□□□□ -1.56
ERVFC1P60507 AC012339.2-201ENST00000523996 453 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 SUB1P1-201ENST00000524415 382 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 AC009643.1-201ENST00000532030 391 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.28□□□□□ -1.56
ERVFC1P60507 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.28□□□□□ -1.56
ERVFC1P60507 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.28□□□□□ -1.56
ERVFC1P60507 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.28□□□□□ -1.56
ERVFC1P60507 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ERVFC1P60507 AC006270.2-201ENST00000578523 652 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 AC100830.2-201ENST00000581636 240 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 RN7SL690P-201ENST00000582087 240 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.28□□□□□ -1.56
ERVFC1P60507 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.28□□□□□ -1.56
ERVFC1P60507 7SK.7-201ENST00000603504 247 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 AL022345.1-201ENST00000607292 135 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.28□□□□□ -1.56
ERVFC1P60507 MIR6853-201ENST00000619642 74 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 CDRT1-208ENST00000630868 794 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.28□□□□□ -1.56
ERVFC1P60507 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.28□□□□□ -1.56
ERVFC1P60507 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
ERVFC1P60507 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
ERVFC1P60507 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.28□□□□□ -1.56
ERVFC1P60507 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.28□□□□□ -1.56
ERVFC1P60507 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
ERVFC1P60507 MTND4P14-201ENST00000435799 1354 ntBASIC5.28□□□□□ -1.56
ERVFC1P60507 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ERVFC1P60507 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ERVFC1P60507 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ERVFC1P60507 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.27□□□□□ -1.57
ERVFC1P60507 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.27□□□□□ -1.57
ERVFC1P60507 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ERVFC1P60507 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
ERVFC1P60507 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
ERVFC1P60507 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
ERVFC1P60507 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ERVFC1P60507 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.27□□□□□ -1.57
ERVFC1P60507 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ERVFC1P60507 RPL23AP57-201ENST00000332361 466 ntBASIC5.27□□□□□ -1.57
ERVFC1P60507 RNA5SP223-201ENST00000365174 120 ntBASIC5.27□□□□□ -1.57
ERVFC1P60507 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ERVFC1P60507 RNU6-317P-201ENST00000384031 107 ntBASIC5.27□□□□□ -1.57
ERVFC1P60507 U3.22-201ENST00000391120 215 ntBASIC5.27□□□□□ -1.57
ERVFC1P60507 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.27□□□□□ -1.57
ERVFC1P60507 RN7SKP58-201ENST00000411010 305 ntBASIC5.27□□□□□ -1.57
ERVFC1P60507 AC245054.2-201ENST00000415639 319 ntBASIC5.27□□□□□ -1.57
ERVFC1P60507 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ERVFC1P60507 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.27□□□□□ -1.57
ERVFC1P60507 NUP35P1-201ENST00000422734 947 ntBASIC5.27□□□□□ -1.57
ERVFC1P60507 HMGN2P27-201ENST00000427352 270 ntBASIC5.27□□□□□ -1.57
ERVFC1P60507 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.27□□□□□ -1.57
ERVFC1P60507 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.27□□□□□ -1.57
ERVFC1P60507 AC009238.2-201ENST00000431026 355 ntBASIC5.27□□□□□ -1.57
ERVFC1P60507 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.27□□□□□ -1.57
ERVFC1P60507 GPR143P-201ENST00000434155 205 ntBASIC5.27□□□□□ -1.57
ERVFC1P60507 RPS15AP9-201ENST00000439856 381 ntBASIC5.27□□□□□ -1.57
ERVFC1P60507 RPS29P9-201ENST00000440360 171 ntBASIC5.27□□□□□ -1.57
ERVFC1P60507 FAM103A2P-201ENST00000444122 354 ntBASIC5.27□□□□□ -1.57
ERVFC1P60507 SLC25A18P1-201ENST00000449385 454 ntBASIC5.27□□□□□ -1.57
ERVFC1P60507 CEACAMP6-201ENST00000452007 574 ntBASIC5.27□□□□□ -1.57
ERVFC1P60507 AL133244.1-201ENST00000456007 258 ntBASIC5.27□□□□□ -1.57
ERVFC1P60507 RNU7-152P-201ENST00000458982 64 ntBASIC5.27□□□□□ -1.57
ERVFC1P60507 APOOP2-201ENST00000461561 539 ntBASIC5.27□□□□□ -1.57
ERVFC1P60507 ABCC13-202ENST00000463099 3842 ntBASIC5.27□□□□□ -1.57
ERVFC1P60507 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.27□□□□□ -1.57
ERVFC1P60507 AC233702.1-201ENST00000482905 502 ntBASIC5.27□□□□□ -1.57
ERVFC1P60507 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms