Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CLRN1P58418 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLRN1P58418 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLRN1P58418 AC107027.3-201ENST00000565095 3473 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLRN1P58418 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.38□□□□□ -1.71
CLRN1P58418 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.38□□□□□ -1.71
CLRN1P58418 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLRN1P58418 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CLRN1P58418 ZNF680P1-201ENST00000436625 1469 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
CLRN1P58418 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLRN1P58418 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLRN1P58418 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CLRN1P58418 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.38□□□□□ -1.71
CLRN1P58418 RNU4-44P-201ENST00000363050 141 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 U8.4-201ENST00000363626 134 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.38□□□□□ -1.71
CLRN1P58418 MIR1-2-201ENST00000384961 85 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 U3.29-201ENST00000391296 212 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 RN7SKP263-201ENST00000411194 309 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.38□□□□□ -1.71
CLRN1P58418 RGS17P1-201ENST00000423358 553 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 AC137499.1-201ENST00000427602 88 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 RPL12P46-201ENST00000436610 195 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLRN1P58418 AC016691.1-201ENST00000441321 413 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.38□□□□□ -1.71
CLRN1P58418 UBDP1-202ENST00000457888 382 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 AC005532.2-201ENST00000467154 373 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 RPL39P36-201ENST00000490784 156 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 AC020893.1-201ENST00000502452 580 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.38□□□□□ -1.71
CLRN1P58418 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.38□□□□□ -1.71
CLRN1P58418 HMGB3P16-201ENST00000508037 287 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
CLRN1P58418 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.38□□□□□ -1.71
CLRN1P58418 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.38□□□□□ -1.71
CLRN1P58418 ENPP7P9-201ENST00000514456 627 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 SCARNA24.1-201ENST00000516465 137 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 BRD9P1-201ENST00000529855 560 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLRN1P58418 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.38□□□□□ -1.71
CLRN1P58418 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.38□□□□□ -1.71
CLRN1P58418 GLYCAM1-201ENST00000546596 285 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 OR4T1P-201ENST00000554933 911 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.38□□□□□ -1.71
CLRN1P58418 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.38□□□□□ -1.71
CLRN1P58418 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.38□□□□□ -1.71
CLRN1P58418 MIR4512-201ENST00000583257 77 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 MIR4691-201ENST00000583764 85 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 AC115621.1-201ENST00000604653 858 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 AC010424.2-201ENST00000607594 443 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.38□□□□□ -1.71
CLRN1P58418 BX323046.1-201ENST00000610145 535 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 AL627230.1-201ENST00000613077 211 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 AL590099.1-201ENST00000615276 138 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 uc_338.12-201ENST00000616344 181 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 AL591926.8-201ENST00000616876 211 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 AC022106.2-201ENST00000620114 757 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 AC006504.8-201ENST00000621046 635 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 AC024940.5-201ENST00000622889 474 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 AC015908.5-201ENST00000623289 343 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 AC099654.10-201ENST00000640395 161 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLRN1P58418 AC108467.2-201ENST00000617640 1597 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLRN1P58418 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.38□□□□□ -1.71
CLRN1P58418 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLRN1P58418 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
CLRN1P58418 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CLRN1P58418 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLRN1P58418 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLRN1P58418 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLRN1P58418 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.38□□□□□ -1.71
CLRN1P58418 AL731532.2-201ENST00000623542 1953 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.38□□□□□ -1.71
CLRN1P58418 AC009643.2-201ENST00000603543 1448 ntBASIC4.38□□□□□ -1.71
CLRN1P58418 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.38□□□□□ -1.71
CLRN1P58418 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLRN1P58418 AL451142.2-201ENST00000429076 2090 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLRN1P58418 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.37□□□□□ -1.71
CLRN1P58418 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLRN1P58418 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CLRN1P58418 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CLRN1P58418 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CLRN1P58418 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CLRN1P58418 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CLRN1P58418 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLRN1P58418 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLRN1P58418 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.37□□□□□ -1.71
CLRN1P58418 RNU1-106P-201ENST00000384382 164 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 RN7SKP213-201ENST00000410746 298 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 CTSL3P-202ENST00000412179 788 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.37□□□□□ -1.71
CLRN1P58418 AL590609.2-201ENST00000421430 368 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.37□□□□□ -1.71
CLRN1P58418 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLRN1P58418 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms