Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CLDN12P56749 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLDN12P56749 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CLDN12P56749 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
CLDN12P56749 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CLDN12P56749 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLDN12P56749 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CLDN12P56749 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLDN12P56749 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLDN12P56749 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
CLDN12P56749 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.62□□□□□ -1.99
CLDN12P56749 RNU6-444P-201ENST00000383988 108 ntBASIC2.62□□□□□ -1.99
CLDN12P56749 SNORA57.1-201ENST00000391227 145 ntBASIC2.62□□□□□ -1.99
CLDN12P56749 HMGB3P31-201ENST00000413333 595 ntBASIC2.62□□□□□ -1.99
CLDN12P56749 UBE2V1P9-201ENST00000414760 368 ntBASIC2.62□□□□□ -1.99
CLDN12P56749 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.62□□□□□ -1.99
CLDN12P56749 OR1AA1P-201ENST00000419597 916 ntBASIC2.62□□□□□ -1.99
CLDN12P56749 AC099677.1-201ENST00000420575 175 ntBASIC2.62□□□□□ -1.99
CLDN12P56749 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CLDN12P56749 AC073310.1-201ENST00000423226 1033 ntBASIC2.62□□□□□ -1.99
CLDN12P56749 UBE2D3P2-201ENST00000424409 445 ntBASIC2.62□□□□□ -1.99
CLDN12P56749 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.62□□□□□ -1.99
CLDN12P56749 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.62□□□□□ -1.99
CLDN12P56749 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CLDN12P56749 ELOCP3-201ENST00000439303 348 ntBASIC2.62□□□□□ -1.99
CLDN12P56749 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.62□□□□□ -1.99
CLDN12P56749 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.62□□□□□ -1.99
CLDN12P56749 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.62□□□□□ -1.99
CLDN12P56749 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.62□□□□□ -1.99
CLDN12P56749 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.62□□□□□ -1.99
CLDN12P56749 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.62□□□□□ -1.99
CLDN12P56749 MTCO3P44-201ENST00000510977 541 ntBASIC2.62□□□□□ -1.99
CLDN12P56749 SNORA31.8-201ENST00000516327 108 ntBASIC2.62□□□□□ -1.99
CLDN12P56749 AC104986.1-201ENST00000517978 436 ntBASIC2.62□□□□□ -1.99
CLDN12P56749 TRMT10BP1-201ENST00000519377 943 ntBASIC2.62□□□□□ -1.99
CLDN12P56749 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.62□□□□□ -1.99
CLDN12P56749 AC018630.1-201ENST00000541376 925 ntBASIC2.62□□□□□ -1.99
CLDN12P56749 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.62□□□□□ -1.99
CLDN12P56749 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.62□□□□□ -1.99
CLDN12P56749 AC012414.2-201ENST00000559474 187 ntBASIC2.62□□□□□ -1.99
CLDN12P56749 AC087481.2-201ENST00000565492 330 ntBASIC2.62□□□□□ -1.99
CLDN12P56749 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.62□□□□□ -1.99
CLDN12P56749 AC245036.5-201ENST00000596330 847 ntBASIC2.62□□□□□ -1.99
CLDN12P56749 AC105227.2-201ENST00000615075 605 ntBASIC2.62□□□□□ -1.99
CLDN12P56749 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.62□□□□□ -1.99
CLDN12P56749 AC007318.2-201ENST00000620999 243 ntBASIC2.62□□□□□ -1.99
CLDN12P56749 AP000676.4-201ENST00000624659 623 ntBASIC2.62□□□□□ -1.99
CLDN12P56749 AP003400.6-201ENST00000624698 740 ntBASIC2.62□□□□□ -1.99
CLDN12P56749 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.62□□□□□ -1.99
CLDN12P56749 CUL1P1-201ENST00000509510 2425 ntBASIC2.62□□□□□ -1.99
CLDN12P56749 AC244517.1-201ENST00000606030 2086 ntBASIC2.62□□□□□ -1.99
CLDN12P56749 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLDN12P56749 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLDN12P56749 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CLDN12P56749 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
CLDN12P56749 RNU6-1249P-201ENST00000363237 111 ntBASIC2.61□□□□□ -1.99
CLDN12P56749 RNU6-799P-201ENST00000363567 107 ntBASIC2.61□□□□□ -1.99
CLDN12P56749 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.61□□□□□ -1.99
CLDN12P56749 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CLDN12P56749 RNU6-1027P-201ENST00000383998 107 ntBASIC2.61□□□□□ -1.99
CLDN12P56749 RNU6-40P-201ENST00000384254 107 ntBASIC2.61□□□□□ -1.99
CLDN12P56749 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.61□□□□□ -1.99
CLDN12P56749 SNORA11C-201ENST00000408532 129 ntBASIC2.61□□□□□ -1.99
CLDN12P56749 UBE2V1P11-201ENST00000411559 285 ntBASIC2.61□□□□□ -1.99
CLDN12P56749 RPS29P4-201ENST00000414733 161 ntBASIC2.61□□□□□ -1.99
CLDN12P56749 AL451074.5-201ENST00000415894 435 ntBASIC2.61□□□□□ -1.99
CLDN12P56749 AL606495.1-201ENST00000422100 813 ntBASIC2.61□□□□□ -1.99
CLDN12P56749 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.61□□□□□ -1.99
CLDN12P56749 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.61□□□□□ -1.99
CLDN12P56749 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.61□□□□□ -1.99
CLDN12P56749 RPL39P40-201ENST00000445481 146 ntBASIC2.61□□□□□ -1.99
CLDN12P56749 MTND1P33-201ENST00000446251 917 ntBASIC2.61□□□□□ -1.99
CLDN12P56749 OR52A4P-203ENST00000498233 1014 ntBASIC2.61□□□□□ -1.99
CLDN12P56749 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.61□□□□□ -1.99
CLDN12P56749 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.61□□□□□ -1.99
CLDN12P56749 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.61□□□□□ -1.99
CLDN12P56749 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.61□□□□□ -1.99
CLDN12P56749 OR8I1P-201ENST00000529291 931 ntBASIC2.61□□□□□ -1.99
CLDN12P56749 OSBPL9P3-201ENST00000534523 595 ntBASIC2.61□□□□□ -1.99
CLDN12P56749 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.61□□□□□ -1.99
CLDN12P56749 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.61□□□□□ -1.99
CLDN12P56749 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.61□□□□□ -1.99
CLDN12P56749 MTCO3P13-201ENST00000577757 781 ntBASIC2.61□□□□□ -1.99
CLDN12P56749 RN7SL339P-201ENST00000580597 296 ntBASIC2.61□□□□□ -1.99
CLDN12P56749 COX6CP3-201ENST00000580869 223 ntBASIC2.61□□□□□ -1.99
CLDN12P56749 AC022069.1-201ENST00000582910 658 ntBASIC2.61□□□□□ -1.99
CLDN12P56749 XIAPP1-201ENST00000603162 600 ntBASIC2.61□□□□□ -1.99
CLDN12P56749 AC009570.1-201ENST00000609599 745 ntBASIC2.61□□□□□ -1.99
CLDN12P56749 AL020991.1-201ENST00000612314 373 ntBASIC2.61□□□□□ -1.99
CLDN12P56749 AC095031.1-201ENST00000623685 672 ntBASIC2.61□□□□□ -1.99
CLDN12P56749 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLDN12P56749 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CLDN12P56749 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CLDN12P56749 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLDN12P56749 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CLDN12P56749 AC073325.2-201ENST00000339545 159 ntBASIC2.6□□□□□ -1.99
CLDN12P56749 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLDN12P56749 RNA5SP50-201ENST00000363731 107 ntBASIC2.6□□□□□ -1.99
CLDN12P56749 RNU6-821P-201ENST00000390995 107 ntBASIC2.6□□□□□ -1.99
CLDN12P56749 ATP5F1P6-201ENST00000402768 767 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms