Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ATP5F1P7-201ENST00000567330 760 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN6P56747 AC012254.4-201ENST00000588843 273 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 AC091152.2-201ENST00000591628 2569 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.06□□□□□ -1.92
CLDN6P56747 VN1R90P-201ENST00000595717 726 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 OR2AS2P-201ENST00000606902 342 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 AL157817.1-201ENST00000614264 790 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CLDN6P56747 AC073569.3-201ENST00000619055 682 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CLDN6P56747 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.06□□□□□ -1.92
CLDN6P56747 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.06□□□□□ -1.92
CLDN6P56747 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CLDN6P56747 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CLDN6P56747 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.05□□□□□ -1.92
CLDN6P56747 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.05□□□□□ -1.92
CLDN6P56747 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.05□□□□□ -1.92
CLDN6P56747 OR5T3-201ENST00000303059 1023 ntBASIC3.05□□□□□ -1.92
CLDN6P56747 RNU6-263P-201ENST00000363811 107 ntBASIC3.05□□□□□ -1.92
CLDN6P56747 RNU6-1181P-201ENST00000384191 106 ntBASIC3.05□□□□□ -1.92
CLDN6P56747 MT-TC-201ENST00000387405 66 ntBASIC3.05□□□□□ -1.92
CLDN6P56747 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN6P56747 MORF4L1P7-201ENST00000426038 703 ntBASIC3.05□□□□□ -1.92
CLDN6P56747 ARF4P2-201ENST00000430209 526 ntBASIC3.05□□□□□ -1.92
CLDN6P56747 AC010881.1-201ENST00000433830 235 ntBASIC3.05□□□□□ -1.92
CLDN6P56747 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.05□□□□□ -1.92
CLDN6P56747 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN6P56747 RAB11AP1-201ENST00000442978 646 ntBASIC3.05□□□□□ -1.92
CLDN6P56747 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN6P56747 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN6P56747 AC008264.1-201ENST00000447612 367 ntBASIC3.05□□□□□ -1.92
CLDN6P56747 AL136097.1-201ENST00000456945 913 ntBASIC3.05□□□□□ -1.92
CLDN6P56747 RPS15AP1-201ENST00000457423 391 ntBASIC3.05□□□□□ -1.92
CLDN6P56747 AC010401.1-201ENST00000463867 348 ntBASIC3.05□□□□□ -1.92
CLDN6P56747 AC087312.1-201ENST00000471411 480 ntBASIC3.05□□□□□ -1.92
CLDN6P56747 AC108729.2-201ENST00000476543 840 ntBASIC3.05□□□□□ -1.92
CLDN6P56747 AL049830.2-201ENST00000480072 201 ntBASIC3.05□□□□□ -1.92
CLDN6P56747 RN7SL432P-201ENST00000484057 298 ntBASIC3.05□□□□□ -1.92
CLDN6P56747 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.05□□□□□ -1.92
CLDN6P56747 RN7SKP132-201ENST00000516001 208 ntBASIC3.05□□□□□ -1.92
CLDN6P56747 SNORA70.19-201ENST00000516717 90 ntBASIC3.05□□□□□ -1.92
CLDN6P56747 PSMA2P1-201ENST00000526365 646 ntBASIC3.05□□□□□ -1.92
CLDN6P56747 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.05□□□□□ -1.92
CLDN6P56747 AL157394.1-201ENST00000562983 1224 ntBASIC3.05□□□□□ -1.92
CLDN6P56747 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN6P56747 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN6P56747 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN6P56747 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN6P56747 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.05□□□□□ -1.92
CLDN6P56747 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN6P56747 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLDN6P56747 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLDN6P56747 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLDN6P56747 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.04□□□□□ -1.92
CLDN6P56747 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLDN6P56747 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLDN6P56747 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLDN6P56747 RNA5SP295-201ENST00000362655 121 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 AP002088.1-201ENST00000382740 395 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 Y_RNA.493-201ENST00000384422 102 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 RNU6-1151P-201ENST00000384684 107 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 SNORD67-201ENST00000390833 111 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 RNU6-837P-201ENST00000391056 108 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 RNU6-796P-201ENST00000391086 107 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLDN6P56747 ATP5F1P6-201ENST00000402768 767 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 SFR1P1-201ENST00000403720 688 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLDN6P56747 EEF1A1P41-201ENST00000414667 207 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 RPS15AP6-201ENST00000420703 385 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.04□□□□□ -1.92
CLDN6P56747 AC093422.3-201ENST00000428506 305 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 AC022018.1-201ENST00000430685 241 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 RPS26P30-201ENST00000443431 335 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 AC005002.1-201ENST00000447458 540 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 SLC31A1P1-201ENST00000451221 567 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 RPL12P26-201ENST00000452430 487 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 AC025181.1-201ENST00000477507 416 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 RPS27P23-201ENST00000487608 251 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.04□□□□□ -1.92
CLDN6P56747 AC133963.2-201ENST00000513686 578 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 RPL12P22-201ENST00000519073 490 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.04□□□□□ -1.92
CLDN6P56747 AC087276.1-201ENST00000529659 480 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.04□□□□□ -1.92
CLDN6P56747 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.04□□□□□ -1.92
CLDN6P56747 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.04□□□□□ -1.92
CLDN6P56747 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.04□□□□□ -1.92
CLDN6P56747 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLDN6P56747 AC011492.1-201ENST00000600023 315 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 AL450270.1-201ENST00000606160 391 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 AL590282.1-201ENST00000610379 1136 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 uc_338.1-201ENST00000612113 180 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.04□□□□□ -1.92
CLDN6P56747 AC068620.4-201ENST00000636730 1182 ntBASIC3.04□□□□□ -1.92
CLDN6P56747 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLDN6P56747 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
CLDN6P56747 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CLDN6P56747 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms