Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.19□□□□□ -1.9
LIM2P55344 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.19□□□□□ -1.9
LIM2P55344 MTCO1P12-201ENST00000414273 1543 ntBASIC3.19□□□□□ -1.9
LIM2P55344 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LIM2P55344 AP005901.5-201ENST00000545779 1796 ntBASIC3.18□□□□□ -1.9
LIM2P55344 Z99496.1-201ENST00000469424 1477 ntBASIC3.18□□□□□ -1.9
LIM2P55344 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
LIM2P55344 RNU1-75P-201ENST00000347264 129 ntBASIC3.18□□□□□ -1.9
LIM2P55344 RNA5SP167-201ENST00000365461 116 ntBASIC3.18□□□□□ -1.9
LIM2P55344 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LIM2P55344 RNU6-730P-201ENST00000383954 104 ntBASIC3.18□□□□□ -1.9
LIM2P55344 SNORD65.1-201ENST00000390889 71 ntBASIC3.18□□□□□ -1.9
LIM2P55344 RNU6-837P-201ENST00000391056 108 ntBASIC3.18□□□□□ -1.9
LIM2P55344 BX323014.1-201ENST00000412876 237 ntBASIC3.18□□□□□ -1.9
LIM2P55344 AC093578.1-201ENST00000415219 368 ntBASIC3.18□□□□□ -1.9
LIM2P55344 RPS7P15-201ENST00000415804 584 ntBASIC3.18□□□□□ -1.9
LIM2P55344 AL356968.1-201ENST00000416622 474 ntBASIC3.18□□□□□ -1.9
LIM2P55344 AC007435.1-201ENST00000421086 415 ntBASIC3.18□□□□□ -1.9
LIM2P55344 RPL7P53-201ENST00000421245 739 ntBASIC3.18□□□□□ -1.9
LIM2P55344 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.18□□□□□ -1.9
LIM2P55344 RPL31P54-201ENST00000429803 370 ntBASIC3.18□□□□□ -1.9
LIM2P55344 BMS1P19-201ENST00000433925 393 ntBASIC3.18□□□□□ -1.9
LIM2P55344 CYCSP43-201ENST00000438233 310 ntBASIC3.18□□□□□ -1.9
LIM2P55344 AL031313.1-201ENST00000448435 256 ntBASIC3.18□□□□□ -1.9
LIM2P55344 AC079776.3-201ENST00000450665 370 ntBASIC3.18□□□□□ -1.9
LIM2P55344 TVP23BP2-201ENST00000455082 615 ntBASIC3.18□□□□□ -1.9
LIM2P55344 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.18□□□□□ -1.9
LIM2P55344 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.18□□□□□ -1.9
LIM2P55344 RPL23AP14-201ENST00000468281 468 ntBASIC3.18□□□□□ -1.9
LIM2P55344 RPS4XP22-201ENST00000480755 780 ntBASIC3.18□□□□□ -1.9
LIM2P55344 RPL7P47-201ENST00000497299 556 ntBASIC3.18□□□□□ -1.9
LIM2P55344 AC078918.1-201ENST00000498515 228 ntBASIC3.18□□□□□ -1.9
LIM2P55344 PRELID3BP6-201ENST00000503839 571 ntBASIC3.18□□□□□ -1.9
LIM2P55344 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.18□□□□□ -1.9
LIM2P55344 AC113347.3-201ENST00000509113 148 ntBASIC3.18□□□□□ -1.9
LIM2P55344 MTCYBP16-201ENST00000509187 1129 ntBASIC3.18□□□□□ -1.9
LIM2P55344 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.18□□□□□ -1.9
LIM2P55344 RNA5SP309-201ENST00000516670 106 ntBASIC3.18□□□□□ -1.9
LIM2P55344 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.18□□□□□ -1.9
LIM2P55344 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.18□□□□□ -1.9
LIM2P55344 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.18□□□□□ -1.9
LIM2P55344 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.18□□□□□ -1.9
LIM2P55344 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.18□□□□□ -1.9
LIM2P55344 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.18□□□□□ -1.9
LIM2P55344 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.18□□□□□ -1.9
LIM2P55344 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.18□□□□□ -1.9
LIM2P55344 AC009101.1-201ENST00000568135 242 ntBASIC3.18□□□□□ -1.9
LIM2P55344 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.18□□□□□ -1.9
LIM2P55344 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.18□□□□□ -1.9
LIM2P55344 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.18□□□□□ -1.9
LIM2P55344 AL445435.1-201ENST00000604232 665 ntBASIC3.18□□□□□ -1.9
LIM2P55344 AC019176.2-201ENST00000611579 315 ntBASIC3.18□□□□□ -1.9
LIM2P55344 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
LIM2P55344 PART1_2.1-201ENST00000612397 250 ntBASIC3.18□□□□□ -1.9
LIM2P55344 AC104763.3-201ENST00000613765 618 ntBASIC3.18□□□□□ -1.9
LIM2P55344 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.18□□□□□ -1.9
LIM2P55344 CYCSP41-201ENST00000616920 296 ntBASIC3.18□□□□□ -1.9
LIM2P55344 U6.105-201ENST00000637379 88 ntBASIC3.18□□□□□ -1.9
LIM2P55344 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.18□□□□□ -1.9
LIM2P55344 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.18□□□□□ -1.9
LIM2P55344 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.18□□□□□ -1.9
LIM2P55344 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.18□□□□□ -1.9
LIM2P55344 CR383658.2-201ENST00000547576 1525 ntBASIC3.18□□□□□ -1.9
LIM2P55344 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.18□□□□□ -1.9
LIM2P55344 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
LIM2P55344 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LIM2P55344 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
LIM2P55344 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LIM2P55344 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
LIM2P55344 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LIM2P55344 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
LIM2P55344 RNU1-33P-201ENST00000364249 162 ntBASIC3.17□□□□□ -1.9
LIM2P55344 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.17□□□□□ -1.9
LIM2P55344 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.17□□□□□ -1.9
LIM2P55344 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
LIM2P55344 RNU6-339P-201ENST00000384310 107 ntBASIC3.17□□□□□ -1.9
LIM2P55344 MIR23B-201ENST00000384832 97 ntBASIC3.17□□□□□ -1.9
LIM2P55344 AL121972.1-201ENST00000402023 252 ntBASIC3.17□□□□□ -1.9
LIM2P55344 AL024474.1-201ENST00000404655 591 ntBASIC3.17□□□□□ -1.9
LIM2P55344 RNA5SP56-201ENST00000410277 118 ntBASIC3.17□□□□□ -1.9
LIM2P55344 RPS3AP25-201ENST00000411660 793 ntBASIC3.17□□□□□ -1.9
LIM2P55344 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LIM2P55344 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.17□□□□□ -1.9
LIM2P55344 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.17□□□□□ -1.9
LIM2P55344 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.17□□□□□ -1.9
LIM2P55344 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.17□□□□□ -1.9
LIM2P55344 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.17□□□□□ -1.9
LIM2P55344 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.17□□□□□ -1.9
LIM2P55344 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.17□□□□□ -1.9
LIM2P55344 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.17□□□□□ -1.9
LIM2P55344 AC005019.1-201ENST00000436455 431 ntBASIC3.17□□□□□ -1.9
LIM2P55344 AC112492.1-201ENST00000449607 712 ntBASIC3.17□□□□□ -1.9
LIM2P55344 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.17□□□□□ -1.9
LIM2P55344 RPL21P10-201ENST00000463521 490 ntBASIC3.17□□□□□ -1.9
LIM2P55344 AC008155.2-201ENST00000464337 397 ntBASIC3.17□□□□□ -1.9
LIM2P55344 RN7SL442P-201ENST00000473804 320 ntBASIC3.17□□□□□ -1.9
LIM2P55344 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.17□□□□□ -1.9
LIM2P55344 AC084024.2-201ENST00000503480 791 ntBASIC3.17□□□□□ -1.9
LIM2P55344 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.17□□□□□ -1.9
LIM2P55344 FTH1P9-201ENST00000513251 355 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms