Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.61□□□□□ -1.83
HMGCS2P54868 ZNF971P-201ENST00000562068 1249 ntBASIC3.61□□□□□ -1.83
HMGCS2P54868 VN1R79P-201ENST00000593540 513 ntBASIC3.61□□□□□ -1.83
HMGCS2P54868 VN1R87P-201ENST00000596706 487 ntBASIC3.61□□□□□ -1.83
HMGCS2P54868 RPL12P50-201ENST00000603116 116 ntBASIC3.61□□□□□ -1.83
HMGCS2P54868 BNIP3P4-201ENST00000604946 565 ntBASIC3.61□□□□□ -1.83
HMGCS2P54868 HMGB1P50-201ENST00000605814 607 ntBASIC3.61□□□□□ -1.83
HMGCS2P54868 CYCSP41-201ENST00000616920 296 ntBASIC3.61□□□□□ -1.83
HMGCS2P54868 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.61□□□□□ -1.83
HMGCS2P54868 AL359715.5-201ENST00000623431 443 ntBASIC3.61□□□□□ -1.83
HMGCS2P54868 AC093908.1-201ENST00000623125 8092 ntBASIC3.61□□□□□ -1.83
HMGCS2P54868 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.61□□□□□ -1.83
HMGCS2P54868 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.61□□□□□ -1.83
HMGCS2P54868 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HMGCS2P54868 AC095050.2-201ENST00000510748 1458 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 AL031985.3-201ENST00000565390 2449 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HMGCS2P54868 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.6□□□□□ -1.83
HMGCS2P54868 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HMGCS2P54868 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.6□□□□□ -1.83
HMGCS2P54868 MIR22-201ENST00000362190 85 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 RNA5SP391-201ENST00000363456 119 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 SNORA72.3-201ENST00000365074 132 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.6□□□□□ -1.83
HMGCS2P54868 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.6□□□□□ -1.83
HMGCS2P54868 RNU6-356P-201ENST00000384140 107 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HMGCS2P54868 DNAJC19P6-201ENST00000401853 280 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 MTCO2P8-201ENST00000412213 658 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 AC106883.1-201ENST00000418805 562 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.6□□□□□ -1.83
HMGCS2P54868 AC092634.2-201ENST00000428146 1010 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 RPL7P28-201ENST00000437739 740 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 AL929288.2-201ENST00000446368 407 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 AL606517.1-201ENST00000446914 387 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.6□□□□□ -1.83
HMGCS2P54868 MRPS31P2-201ENST00000451581 518 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 RPL21P8-201ENST00000465083 535 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 RPS4XP22-201ENST00000480755 780 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 AC068724.1-201ENST00000487100 792 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 AC092045.1-201ENST00000495716 1231 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 AC096571.1-202ENST00000506634 735 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 AC093752.1-206ENST00000511823 336 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.6□□□□□ -1.83
HMGCS2P54868 RNU6-276P-201ENST00000516114 96 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 RN7SKP272-201ENST00000516988 232 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 AC091163.3-201ENST00000518269 1144 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 AC027309.2-201ENST00000520566 192 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.6□□□□□ -1.83
HMGCS2P54868 NDUFB9P3-201ENST00000521269 501 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.6□□□□□ -1.83
HMGCS2P54868 CENPUP2-201ENST00000555897 1186 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 AC090751.1-201ENST00000566966 267 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.6□□□□□ -1.83
HMGCS2P54868 AL034351.1-201ENST00000605288 668 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.6□□□□□ -1.83
HMGCS2P54868 MIR6864-201ENST00000617935 70 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 BX649567.1-201ENST00000642071 1134 ntBASIC3.6□□□□□ -1.83
HMGCS2P54868 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
HMGCS2P54868 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HMGCS2P54868 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HMGCS2P54868 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HMGCS2P54868 AC073055.1-201ENST00000456901 1621 ntBASIC3.59□□□□□ -1.83
HMGCS2P54868 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMGCS2P54868 AC008725.1-201ENST00000605123 2263 ntBASIC3.59□□□□□ -1.83
HMGCS2P54868 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HMGCS2P54868 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.59□□□□□ -1.83
HMGCS2P54868 AP000568.1-201ENST00000282964 442 ntBASIC3.59□□□□□ -1.83
HMGCS2P54868 OR5J1P-201ENST00000313544 939 ntBASIC3.59□□□□□ -1.83
HMGCS2P54868 RNU6-1339P-201ENST00000363574 91 ntBASIC3.59□□□□□ -1.83
HMGCS2P54868 RNA5SP167-201ENST00000365461 116 ntBASIC3.59□□□□□ -1.83
HMGCS2P54868 RNU6-584P-201ENST00000410350 95 ntBASIC3.59□□□□□ -1.83
HMGCS2P54868 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.59□□□□□ -1.83
HMGCS2P54868 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGCS2P54868 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.59□□□□□ -1.83
HMGCS2P54868 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.59□□□□□ -1.83
HMGCS2P54868 AL139132.1-201ENST00000431587 344 ntBASIC3.59□□□□□ -1.83
HMGCS2P54868 RPS7P5-201ENST00000441482 581 ntBASIC3.59□□□□□ -1.83
HMGCS2P54868 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGCS2P54868 HMGB1P16-201ENST00000447155 540 ntBASIC3.59□□□□□ -1.83
HMGCS2P54868 Z99127.3-201ENST00000448158 395 ntBASIC3.59□□□□□ -1.83
HMGCS2P54868 OR2A20P-203ENST00000498397 1268 ntBASIC3.59□□□□□ -1.83
HMGCS2P54868 AC091826.1-201ENST00000514065 313 ntBASIC3.59□□□□□ -1.83
HMGCS2P54868 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HMGCS2P54868 RN7SKP234-201ENST00000517173 224 ntBASIC3.59□□□□□ -1.83
HMGCS2P54868 AC008562.1-201ENST00000521763 330 ntBASIC3.59□□□□□ -1.83
HMGCS2P54868 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGCS2P54868 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGCS2P54868 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGCS2P54868 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGCS2P54868 AC087897.1-201ENST00000550134 156 ntBASIC3.59□□□□□ -1.83
HMGCS2P54868 CBX3P5-201ENST00000552017 521 ntBASIC3.59□□□□□ -1.83
HMGCS2P54868 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGCS2P54868 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGCS2P54868 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.59□□□□□ -1.83
HMGCS2P54868 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGCS2P54868 CYP2C60P-201ENST00000566088 139 ntBASIC3.59□□□□□ -1.83
HMGCS2P54868 MTCO1P40-201ENST00000574371 625 ntBASIC3.59□□□□□ -1.83
HMGCS2P54868 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.59□□□□□ -1.83
HMGCS2P54868 RNA5SP108-201ENST00000605921 117 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms