Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC022447.1-201ENST00000515358 464 ntBASIC4.51□□□□□ -1.69
COPAP53621 HIGD1AP3-201ENST00000515857 278 ntBASIC4.51□□□□□ -1.69
COPAP53621 RNU4-60P-201ENST00000517239 135 ntBASIC4.51□□□□□ -1.69
COPAP53621 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.51□□□□□ -1.69
COPAP53621 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.51□□□□□ -1.69
COPAP53621 AP004247.1-201ENST00000531556 1289 ntBASIC4.51□□□□□ -1.69
COPAP53621 AC013828.2-201ENST00000532487 235 ntBASIC4.51□□□□□ -1.69
COPAP53621 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.51□□□□□ -1.69
COPAP53621 TRAV8-5-201ENST00000537369 341 ntBASIC4.51□□□□□ -1.69
COPAP53621 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.51□□□□□ -1.69
COPAP53621 OR6C7P-201ENST00000547875 934 ntBASIC4.51□□□□□ -1.69
COPAP53621 AC069240.1-201ENST00000548774 375 ntBASIC4.51□□□□□ -1.69
COPAP53621 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.51□□□□□ -1.69
COPAP53621 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.51□□□□□ -1.69
COPAP53621 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.51□□□□□ -1.69
COPAP53621 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.51□□□□□ -1.69
COPAP53621 AC012414.6-201ENST00000568241 401 ntBASIC4.51□□□□□ -1.69
COPAP53621 AGGF1P4-201ENST00000568249 801 ntBASIC4.51□□□□□ -1.69
COPAP53621 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.51□□□□□ -1.69
COPAP53621 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.51□□□□□ -1.69
COPAP53621 AC068790.6-201ENST00000602558 258 ntBASIC4.51□□□□□ -1.69
COPAP53621 AC090186.1-201ENST00000605991 572 ntBASIC4.51□□□□□ -1.69
COPAP53621 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.51□□□□□ -1.69
COPAP53621 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.51□□□□□ -1.69
COPAP53621 AC138649.5-201ENST00000637456 137 ntBASIC4.51□□□□□ -1.69
COPAP53621 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.51□□□□□ -1.69
COPAP53621 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
COPAP53621 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
COPAP53621 AC006971.1-201ENST00000407916 4486 ntBASIC4.51□□□□□ -1.69
COPAP53621 ZNF734P-201ENST00000419494 1534 ntBASIC4.51□□□□□ -1.69
COPAP53621 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
COPAP53621 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COPAP53621 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COPAP53621 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COPAP53621 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COPAP53621 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COPAP53621 KPNA2P2-201ENST00000419546 1489 ntBASIC4.5□□□□□ -1.69
COPAP53621 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.5□□□□□ -1.69
COPAP53621 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
COPAP53621 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COPAP53621 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COPAP53621 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COPAP53621 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COPAP53621 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COPAP53621 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.5□□□□□ -1.69
COPAP53621 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COPAP53621 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
COPAP53621 RNA5SP52-201ENST00000362448 134 ntBASIC4.5□□□□□ -1.69
COPAP53621 SNORA70C-201ENST00000384538 135 ntBASIC4.5□□□□□ -1.69
COPAP53621 LAP3P1-201ENST00000403648 294 ntBASIC4.5□□□□□ -1.69
COPAP53621 MTCYBP36-201ENST00000404146 440 ntBASIC4.5□□□□□ -1.69
COPAP53621 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.5□□□□□ -1.69
COPAP53621 RPL23AP26-201ENST00000412728 464 ntBASIC4.5□□□□□ -1.69
COPAP53621 MTATP6P27-201ENST00000416987 621 ntBASIC4.5□□□□□ -1.69
COPAP53621 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.5□□□□□ -1.69
COPAP53621 MTCO2P5-201ENST00000422621 426 ntBASIC4.5□□□□□ -1.69
COPAP53621 RPS27AP14-201ENST00000422868 454 ntBASIC4.5□□□□□ -1.69
COPAP53621 RPS27AP12-201ENST00000429552 465 ntBASIC4.5□□□□□ -1.69
COPAP53621 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.5□□□□□ -1.69
COPAP53621 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.5□□□□□ -1.69
COPAP53621 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.5□□□□□ -1.69
COPAP53621 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.5□□□□□ -1.69
COPAP53621 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.5□□□□□ -1.69
COPAP53621 RNA5SP269-201ENST00000459032 137 ntBASIC4.5□□□□□ -1.69
COPAP53621 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.5□□□□□ -1.69
COPAP53621 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
COPAP53621 AC041039.1-201ENST00000485656 536 ntBASIC4.5□□□□□ -1.69
COPAP53621 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.5□□□□□ -1.69
COPAP53621 AC021678.1-201ENST00000505195 936 ntBASIC4.5□□□□□ -1.69
COPAP53621 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.5□□□□□ -1.69
COPAP53621 CBX3P3-201ENST00000508108 532 ntBASIC4.5□□□□□ -1.69
COPAP53621 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.5□□□□□ -1.69
COPAP53621 RNA5SP309-201ENST00000516670 106 ntBASIC4.5□□□□□ -1.69
COPAP53621 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.5□□□□□ -1.69
COPAP53621 AL391156.1-201ENST00000554965 554 ntBASIC4.5□□□□□ -1.69
COPAP53621 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
COPAP53621 AC007224.1-201ENST00000564410 144 ntBASIC4.5□□□□□ -1.69
COPAP53621 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.5□□□□□ -1.69
COPAP53621 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COPAP53621 AC067959.1-201ENST00000604334 379 ntBASIC4.5□□□□□ -1.69
COPAP53621 AL590240.3-201ENST00000621416 943 ntBASIC4.5□□□□□ -1.69
COPAP53621 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
COPAP53621 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.5□□□□□ -1.69
COPAP53621 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.5□□□□□ -1.69
COPAP53621 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.5□□□□□ -1.69
COPAP53621 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.5□□□□□ -1.69
COPAP53621 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.5□□□□□ -1.69
COPAP53621 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COPAP53621 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COPAP53621 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.5□□□□□ -1.69
COPAP53621 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.49□□□□□ -1.69
COPAP53621 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COPAP53621 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
COPAP53621 AC015813.6-201ENST00000624409 5808 ntBASIC4.49□□□□□ -1.69
COPAP53621 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.49□□□□□ -1.69
COPAP53621 MARK2P15-201ENST00000432204 2186 ntBASIC4.49□□□□□ -1.69
COPAP53621 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
COPAP53621 RNU1-132P-201ENST00000364300 164 ntBASIC4.49□□□□□ -1.69
COPAP53621 RNU6-192P-201ENST00000391253 100 ntBASIC4.49□□□□□ -1.69
COPAP53621 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms