Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.52□□□□□ -1.69
NEK3P51956 RHOT1P2-201ENST00000366423 333 ntBASIC4.52□□□□□ -1.69
NEK3P51956 RNU6-1074P-201ENST00000383995 104 ntBASIC4.52□□□□□ -1.69
NEK3P51956 MIR513A2-201ENST00000385249 127 ntBASIC4.52□□□□□ -1.69
NEK3P51956 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NEK3P51956 LAP3P1-201ENST00000403648 294 ntBASIC4.52□□□□□ -1.69
NEK3P51956 RNA5SP39-201ENST00000411245 120 ntBASIC4.52□□□□□ -1.69
NEK3P51956 TMSB10P2-201ENST00000416049 131 ntBASIC4.52□□□□□ -1.69
NEK3P51956 OR8F1P-201ENST00000425243 930 ntBASIC4.52□□□□□ -1.69
NEK3P51956 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.52□□□□□ -1.69
NEK3P51956 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.52□□□□□ -1.69
NEK3P51956 FAM103A2P-201ENST00000444122 354 ntBASIC4.52□□□□□ -1.69
NEK3P51956 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.52□□□□□ -1.69
NEK3P51956 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.52□□□□□ -1.69
NEK3P51956 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.52□□□□□ -1.69
NEK3P51956 AC098824.1-201ENST00000453565 980 ntBASIC4.52□□□□□ -1.69
NEK3P51956 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.52□□□□□ -1.69
NEK3P51956 AC079804.1-201ENST00000461922 436 ntBASIC4.52□□□□□ -1.69
NEK3P51956 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.52□□□□□ -1.69
NEK3P51956 AC105313.1-201ENST00000509121 353 ntBASIC4.52□□□□□ -1.69
NEK3P51956 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.52□□□□□ -1.69
NEK3P51956 OR5D17P-201ENST00000531492 978 ntBASIC4.52□□□□□ -1.69
NEK3P51956 AL356057.1-201ENST00000533798 831 ntBASIC4.52□□□□□ -1.69
NEK3P51956 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.52□□□□□ -1.69
NEK3P51956 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NEK3P51956 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.52□□□□□ -1.69
NEK3P51956 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.52□□□□□ -1.69
NEK3P51956 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.52□□□□□ -1.69
NEK3P51956 AC022916.3-201ENST00000592961 742 ntBASIC4.52□□□□□ -1.69
NEK3P51956 AL031985.2-201ENST00000600955 480 ntBASIC4.52□□□□□ -1.69
NEK3P51956 AC020634.1-201ENST00000608701 549 ntBASIC4.52□□□□□ -1.69
NEK3P51956 AC006023.2-201ENST00000609916 167 ntBASIC4.52□□□□□ -1.69
NEK3P51956 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.52□□□□□ -1.69
NEK3P51956 AC006338.2-201ENST00000616864 791 ntBASIC4.52□□□□□ -1.69
NEK3P51956 MIR6130-201ENST00000619419 109 ntBASIC4.52□□□□□ -1.69
NEK3P51956 AC015967.1-201ENST00000619893 476 ntBASIC4.52□□□□□ -1.69
NEK3P51956 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NEK3P51956 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.52□□□□□ -1.69
NEK3P51956 CU459211.1-201ENST00000635667 749 ntBASIC4.52□□□□□ -1.69
NEK3P51956 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.52□□□□□ -1.69
NEK3P51956 NXPH1-205ENST00000602349 1953 ntBASIC4.52□□□□□ -1.69
NEK3P51956 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.52□□□□□ -1.69
NEK3P51956 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.52□□□□□ -1.69
NEK3P51956 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NEK3P51956 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.52□□□□□ -1.69
NEK3P51956 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NEK3P51956 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.52□□□□□ -1.69
NEK3P51956 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.52□□□□□ -1.69
NEK3P51956 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.52□□□□□ -1.69
NEK3P51956 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.52□□□□□ -1.69
NEK3P51956 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NEK3P51956 MTCO1P9-201ENST00000505577 1534 ntBASIC4.51□□□□□ -1.69
NEK3P51956 AC009902.3-201ENST00000606235 2172 ntBASIC4.51□□□□□ -1.69
NEK3P51956 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NEK3P51956 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
NEK3P51956 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NEK3P51956 ZNF833P-201ENST00000424938 1494 ntBASIC4.51□□□□□ -1.69
NEK3P51956 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NEK3P51956 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NEK3P51956 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NEK3P51956 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
NEK3P51956 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.51□□□□□ -1.69
NEK3P51956 Y_RNA.97-201ENST00000363094 102 ntBASIC4.51□□□□□ -1.69
NEK3P51956 U8.14-201ENST00000390843 143 ntBASIC4.51□□□□□ -1.69
NEK3P51956 RPL7P8-201ENST00000411964 730 ntBASIC4.51□□□□□ -1.69
NEK3P51956 MTND1P21-201ENST00000412991 285 ntBASIC4.51□□□□□ -1.69
NEK3P51956 TOMM22P1-201ENST00000418578 312 ntBASIC4.51□□□□□ -1.69
NEK3P51956 DUTP6-201ENST00000425573 462 ntBASIC4.51□□□□□ -1.69
NEK3P51956 AL445669.1-201ENST00000426743 755 ntBASIC4.51□□□□□ -1.69
NEK3P51956 RPL23AP25-201ENST00000430973 463 ntBASIC4.51□□□□□ -1.69
NEK3P51956 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.51□□□□□ -1.69
NEK3P51956 HLA-N-201ENST00000437516 135 ntBASIC4.51□□□□□ -1.69
NEK3P51956 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.51□□□□□ -1.69
NEK3P51956 AL138799.3-201ENST00000438968 350 ntBASIC4.51□□□□□ -1.69
NEK3P51956 CBX1P1-201ENST00000440184 427 ntBASIC4.51□□□□□ -1.69
NEK3P51956 RPL7P36-201ENST00000444633 681 ntBASIC4.51□□□□□ -1.69
NEK3P51956 RPL23AP43-201ENST00000446445 471 ntBASIC4.51□□□□□ -1.69
NEK3P51956 AC010655.1-201ENST00000449336 292 ntBASIC4.51□□□□□ -1.69
NEK3P51956 KATNBL1P6-201ENST00000453433 915 ntBASIC4.51□□□□□ -1.69
NEK3P51956 RPL21P104-201ENST00000464143 478 ntBASIC4.51□□□□□ -1.69
NEK3P51956 AC116337.2-201ENST00000477662 156 ntBASIC4.51□□□□□ -1.69
NEK3P51956 AC110792.1-201ENST00000491826 472 ntBASIC4.51□□□□□ -1.69
NEK3P51956 RN7SL810P-201ENST00000493031 276 ntBASIC4.51□□□□□ -1.69
NEK3P51956 AC096751.1-202ENST00000502691 1067 ntBASIC4.51□□□□□ -1.69
NEK3P51956 AC093534.1-201ENST00000504977 132 ntBASIC4.51□□□□□ -1.69
NEK3P51956 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.51□□□□□ -1.69
NEK3P51956 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.51□□□□□ -1.69
NEK3P51956 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.51□□□□□ -1.69
NEK3P51956 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.51□□□□□ -1.69
NEK3P51956 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.51□□□□□ -1.69
NEK3P51956 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.51□□□□□ -1.69
NEK3P51956 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.51□□□□□ -1.69
NEK3P51956 AC084824.1-201ENST00000550917 1005 ntBASIC4.51□□□□□ -1.69
NEK3P51956 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NEK3P51956 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.51□□□□□ -1.69
NEK3P51956 AL022161.1-201ENST00000604390 213 ntBASIC4.51□□□□□ -1.69
NEK3P51956 AL353748.2-201ENST00000622148 471 ntBASIC4.51□□□□□ -1.69
NEK3P51956 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.51□□□□□ -1.69
NEK3P51956 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
NEK3P51956 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms