Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXA1P49639 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXA1P49639 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXA1P49639 AP000403.1-201ENST00000603349 851 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AC020910.2-201ENST00000603635 610 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AC013244.1-201ENST00000604279 193 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AC090186.1-201ENST00000605991 572 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AC098614.4-201ENST00000607601 462 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AC092354.2-201ENST00000607786 514 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA1P49639 AL512624.1-201ENST00000613638 469 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AC100793.4-201ENST00000613683 429 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AC016769.4-201ENST00000616893 535 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AL357080.1-201ENST00000617394 239 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AC073968.1-201ENST00000618594 637 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 AC009318.4-201ENST00000620496 486 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HOXA1P49639 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXA1P49639 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.58□□□□□ -1.84
HOXA1P49639 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA1P49639 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA1P49639 LINC00622-201ENST00000562811 1570 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 NCAPGP1-201ENST00000505112 1814 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA1P49639 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
HOXA1P49639 BDP1P-201ENST00000582658 1990 ntBASIC3.58□□□□□ -1.84
HOXA1P49639 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA1P49639 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
HOXA1P49639 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA1P49639 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXA1P49639 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXA1P49639 AC131971.1-201ENST00000332881 1482 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 AL590240.1-201ENST00000334118 313 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXA1P49639 U3.15-201ENST00000365398 212 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 SNORD82-201ENST00000365530 70 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HOXA1P49639 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HOXA1P49639 RNU6-809P-201ENST00000384461 107 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 Y_RNA.517-201ENST00000384551 106 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 EI24P2-201ENST00000397776 1076 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 SDHCP2-201ENST00000398565 501 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 AL031679.1-201ENST00000400616 525 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 HMGB1P17-201ENST00000403495 628 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 AL663109.1-201ENST00000411498 844 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXA1P49639 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXA1P49639 RPS7P13-201ENST00000413955 498 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA1P49639 RPS27AP7-201ENST00000422792 455 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 RPS27AP14-201ENST00000422868 454 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXA1P49639 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.57□□□□□ -1.84
HOXA1P49639 NPM1P34-201ENST00000428821 893 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA1P49639 AC005154.2-201ENST00000438110 379 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 MTND4P4-201ENST00000439033 1366 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 ATP5C1P1-201ENST00000441945 895 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA1P49639 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXA1P49639 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXA1P49639 BX276092.4-201ENST00000452056 248 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 CPHL1P-201ENST00000461341 3407 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 RN7SL93P-201ENST00000463035 293 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 AC090453.1-201ENST00000495560 436 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 OR5M14P-201ENST00000506803 618 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 AC093809.1-201ENST00000509155 340 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 AC005798.1-201ENST00000513715 387 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 AC034159.1-201ENST00000513885 583 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 MTND4LP31-201ENST00000514859 294 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXA1P49639 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA1P49639 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXA1P49639 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXA1P49639 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA1P49639 AP004247.1-201ENST00000531556 1289 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 AC024224.1-201ENST00000538284 609 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 AC074029.1-201ENST00000552531 1044 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXA1P49639 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
HOXA1P49639 AC083760.1-201ENST00000589621 670 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 AC087683.1-201ENST00000591187 441 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA1P49639 BBIP1P1-201ENST00000602999 279 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 AC006254.3-201ENST00000603353 884 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 PRELID3BP8-201ENST00000604148 295 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 AL031320.1-201ENST00000604177 357 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 BCRP9-201ENST00000605312 388 ntBASIC3.57□□□□□ -1.84
HOXA1P49639 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXA1P49639 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXA1P49639 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXA1P49639 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXA1P49639 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXA1P49639 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
HOXA1P49639 AC090229.1-201ENST00000590983 1609 ntBASIC3.56□□□□□ -1.84
HOXA1P49639 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms