Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.43□□□□□ -1.86
NKX2-1P43699 AL390237.1-201ENST00000404226 1415 ntBASIC3.43□□□□□ -1.86
NKX2-1P43699 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.42□□□□□ -1.86
NKX2-1P43699 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NKX2-1P43699 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.42□□□□□ -1.86
NKX2-1P43699 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.42□□□□□ -1.86
NKX2-1P43699 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
NKX2-1P43699 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NKX2-1P43699 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NKX2-1P43699 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
NKX2-1P43699 AC004925.1-201ENST00000624256 2706 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
NKX2-1P43699 AL121657.1-201ENST00000327215 531 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 AL672167.1-206ENST00000356293 943 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.42□□□□□ -1.86
NKX2-1P43699 Y_RNA.560-201ENST00000384689 102 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.42□□□□□ -1.86
NKX2-1P43699 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
NKX2-1P43699 MIR1305-201ENST00000408300 86 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 MTCO3P12-201ENST00000416718 547 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.42□□□□□ -1.86
NKX2-1P43699 OR1AA1P-201ENST00000419597 916 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 COX6CP17-201ENST00000421389 185 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.42□□□□□ -1.86
NKX2-1P43699 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.42□□□□□ -1.86
NKX2-1P43699 AC016712.1-201ENST00000431088 378 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 RPL21P112-201ENST00000434403 463 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 AC096638.2-201ENST00000434965 711 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NKX2-1P43699 AL512286.1-201ENST00000439244 400 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.42□□□□□ -1.86
NKX2-1P43699 MTCO1P27-201ENST00000448269 226 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 AL162591.2-201ENST00000449634 317 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 RPL5P32-201ENST00000454085 879 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 RN7SL826P-201ENST00000479724 288 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 AC007686.1-201ENST00000488511 463 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 AC080014.1-201ENST00000496877 1201 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.42□□□□□ -1.86
NKX2-1P43699 AC091435.1-201ENST00000505442 584 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.42□□□□□ -1.86
NKX2-1P43699 AL592156.1-201ENST00000508758 304 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.42□□□□□ -1.86
NKX2-1P43699 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.42□□□□□ -1.86
NKX2-1P43699 AC010342.1-201ENST00000514047 877 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 MTCO2P32-201ENST00000514865 403 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 MIR2114-201ENST00000516645 80 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 NARSP2-201ENST00000518524 679 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 AP000827.1-201ENST00000527814 258 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 OR4P1P-201ENST00000530808 1136 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.42□□□□□ -1.86
NKX2-1P43699 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NKX2-1P43699 AP004242.1-201ENST00000533701 349 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.42□□□□□ -1.86
NKX2-1P43699 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.42□□□□□ -1.86
NKX2-1P43699 PCMTD1P2-201ENST00000565017 355 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.42□□□□□ -1.86
NKX2-1P43699 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.42□□□□□ -1.86
NKX2-1P43699 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.42□□□□□ -1.86
NKX2-1P43699 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.42□□□□□ -1.86
NKX2-1P43699 AL022161.1-201ENST00000604390 213 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 AC104662.1-201ENST00000604448 511 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 AC090186.1-201ENST00000605991 572 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 OR2AS2P-201ENST00000606902 342 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 RN7SL722P-201ENST00000617780 284 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 RN7SL565P-201ENST00000618246 284 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 AL713922.2-201ENST00000619384 716 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 AC007494.3-201ENST00000624660 743 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NKX2-1P43699 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NKX2-1P43699 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NKX2-1P43699 AL022578.1-201ENST00000439330 1433 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
NKX2-1P43699 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NKX2-1P43699 AL031985.3-201ENST00000565390 2449 ntBASIC3.42□□□□□ -1.86
NKX2-1P43699 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NKX2-1P43699 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NKX2-1P43699 AP001486.2-201ENST00000561652 5113 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.41□□□□□ -1.86
NKX2-1P43699 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
NKX2-1P43699 FAM35DP-201ENST00000323387 2712 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NKX2-1P43699 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NKX2-1P43699 AL161781.1-201ENST00000354277 403 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 RNU6-623P-201ENST00000363143 105 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
NKX2-1P43699 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
NKX2-1P43699 MIR607-201ENST00000385241 96 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 MT-TH-201ENST00000387441 69 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
NKX2-1P43699 RNA5SP397-201ENST00000391323 118 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NKX2-1P43699 CYB5AP4-201ENST00000396692 399 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 AC245052.5-201ENST00000416320 649 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 NPM1P11-201ENST00000417106 855 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 USP9YP9-201ENST00000429406 715 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.41□□□□□ -1.86
NKX2-1P43699 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.41□□□□□ -1.86
NKX2-1P43699 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.41□□□□□ -1.86
NKX2-1P43699 ATP5HP2-201ENST00000433885 485 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms