Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AC006206.1-201ENST00000544842 3387 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA4P43681 LINC02019-201ENST00000608605 2060 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA4P43681 AL034546.1-201ENST00000623740 3693 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.63□□□□□ -1.51
CHRNA4P43681 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA4P43681 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CHRNA4P43681 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA4P43681 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.63□□□□□ -1.51
CHRNA4P43681 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CHRNA4P43681 AL355488.2-201ENST00000609909 2850 ntBASIC5.62□□□□□ -1.51
CHRNA4P43681 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA4P43681 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CHRNA4P43681 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.62□□□□□ -1.51
CHRNA4P43681 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.62□□□□□ -1.51
CHRNA4P43681 SNORD27-201ENST00000363981 72 ntBASIC5.62□□□□□ -1.51
CHRNA4P43681 SNORA62.1-201ENST00000364287 154 ntBASIC5.62□□□□□ -1.51
CHRNA4P43681 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.62□□□□□ -1.51
CHRNA4P43681 OR52E6-202ENST00000379946 954 ntBASIC5.62□□□□□ -1.51
CHRNA4P43681 CBX1P3-201ENST00000413296 527 ntBASIC5.62□□□□□ -1.51
CHRNA4P43681 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.62□□□□□ -1.51
CHRNA4P43681 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.62□□□□□ -1.51
CHRNA4P43681 RNF10P1-201ENST00000418589 369 ntBASIC5.62□□□□□ -1.51
CHRNA4P43681 AC113412.1-201ENST00000425840 504 ntBASIC5.62□□□□□ -1.51
CHRNA4P43681 RPL7P2-201ENST00000427639 268 ntBASIC5.62□□□□□ -1.51
CHRNA4P43681 AC236972.1-201ENST00000433225 199 ntBASIC5.62□□□□□ -1.51
CHRNA4P43681 RPL23AP89-201ENST00000439324 255 ntBASIC5.62□□□□□ -1.51
CHRNA4P43681 AC099799.1-201ENST00000439809 192 ntBASIC5.62□□□□□ -1.51
CHRNA4P43681 SNRPFP3-201ENST00000457792 225 ntBASIC5.62□□□□□ -1.51
CHRNA4P43681 SNORD125-201ENST00000459538 96 ntBASIC5.62□□□□□ -1.51
CHRNA4P43681 AC004801.2-202ENST00000463559 283 ntBASIC5.62□□□□□ -1.51
CHRNA4P43681 AC104563.1-201ENST00000476147 376 ntBASIC5.62□□□□□ -1.51
CHRNA4P43681 AC090686.1-201ENST00000481577 749 ntBASIC5.62□□□□□ -1.51
CHRNA4P43681 ATP5LP5-201ENST00000483050 299 ntBASIC5.62□□□□□ -1.51
CHRNA4P43681 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA4P43681 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CHRNA4P43681 HSPE1P3-201ENST00000559254 309 ntBASIC5.62□□□□□ -1.51
CHRNA4P43681 MRPS21P7-201ENST00000566937 238 ntBASIC5.62□□□□□ -1.51
CHRNA4P43681 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA4P43681 MIR3146-201ENST00000580367 79 ntBASIC5.62□□□□□ -1.51
CHRNA4P43681 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.62□□□□□ -1.51
CHRNA4P43681 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CHRNA4P43681 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.62□□□□□ -1.51
CHRNA4P43681 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.62□□□□□ -1.51
CHRNA4P43681 MIR4302-201ENST00000638058 60 ntBASIC5.62□□□□□ -1.51
CHRNA4P43681 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA4P43681 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA4P43681 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
CHRNA4P43681 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA4P43681 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA4P43681 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA4P43681 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA4P43681 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.62□□□□□ -1.51
CHRNA4P43681 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA4P43681 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.62□□□□□ -1.51
CHRNA4P43681 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA4P43681 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA4P43681 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA4P43681 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.62□□□□□ -1.51
CHRNA4P43681 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CHRNA4P43681 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNA4P43681 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNA4P43681 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNA4P43681 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.61□□□□□ -1.51
CHRNA4P43681 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNA4P43681 RNU6-212P-201ENST00000362642 104 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 Y_RNA.64-201ENST00000362845 102 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 RNU6-666P-201ENST00000363499 107 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 RNU6-81P-201ENST00000365608 104 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNA4P43681 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNA4P43681 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNA4P43681 RNU6-1029P-201ENST00000384109 107 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 MIR613-201ENST00000385248 95 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 RNA5SP105-201ENST00000391123 113 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 AL031985.1-201ENST00000392713 418 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CHRNA4P43681 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CHRNA4P43681 DHFRP6-201ENST00000401776 268 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 AL009179.1-201ENST00000406085 265 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 DPPA2P2-201ENST00000418220 897 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 E2F6P2-201ENST00000420708 748 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 AC007161.1-204ENST00000423039 460 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 USP9YP4-201ENST00000424401 1745 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 AC138761.5-201ENST00000433967 325 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 AC012075.1-201ENST00000436549 580 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.61□□□□□ -1.51
CHRNA4P43681 AC064862.4-201ENST00000442180 334 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 CYCSP24-201ENST00000445119 316 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 AL139109.1-201ENST00000455491 297 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNA4P43681 AC109481.1-201ENST00000509173 282 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 RNU6-120P-201ENST00000516077 103 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 AC135001.1-201ENST00000544546 283 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.61□□□□□ -1.51
CHRNA4P43681 AC128657.1-201ENST00000549459 145 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.61□□□□□ -1.51
CHRNA4P43681 RPL21P12-201ENST00000559810 515 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 MIR5583-1-201ENST00000580941 59 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms