Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC078918.1-201ENST00000498515 228 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 RNU1-143P-201ENST00000516296 146 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.2□□□□□ -1.9
SHMT2P34897 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.2□□□□□ -1.9
SHMT2P34897 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.2□□□□□ -1.9
SHMT2P34897 OR5D17P-201ENST00000531492 978 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.2□□□□□ -1.9
SHMT2P34897 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.2□□□□□ -1.9
SHMT2P34897 HIGD1AP1-201ENST00000550979 275 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.2□□□□□ -1.9
SHMT2P34897 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.2□□□□□ -1.9
SHMT2P34897 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.2□□□□□ -1.9
SHMT2P34897 ZNF971P-201ENST00000562068 1249 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.2□□□□□ -1.9
SHMT2P34897 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.2□□□□□ -1.9
SHMT2P34897 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.2□□□□□ -1.9
SHMT2P34897 CKS1BP3-201ENST00000600888 237 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.2□□□□□ -1.9
SHMT2P34897 AC007179.3-201ENST00000604976 235 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 U1.23-201ENST00000610293 146 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 uc_338.1-201ENST00000612113 180 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 RNU1-68P-201ENST00000615382 146 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SHMT2P34897 AC121761.2-201ENST00000617300 689 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 VN1R7P-201ENST00000619242 903 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 AC007275.1-201ENST00000621243 671 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 U1.39-201ENST00000621562 146 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 AP002371.2-201ENST00000624450 503 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 SNORA50A-202ENST00000629536 136 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 AL136520.1-201ENST00000600311 1322 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 PABPC1P7-201ENST00000413177 1513 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.19□□□□□ -1.9
SHMT2P34897 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SHMT2P34897 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SHMT2P34897 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SHMT2P34897 RNA5SP383-201ENST00000362934 120 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHMT2P34897 RNU6-921P-201ENST00000384361 107 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 AP000567.1-201ENST00000406413 156 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 RNA5SP120-201ENST00000410900 112 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 RNU6-575P-201ENST00000411326 105 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 HMGB3P23-201ENST00000414981 585 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 KRR1P1-201ENST00000419430 803 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 AC233981.1-201ENST00000423224 461 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 AC005517.2-201ENST00000424673 553 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.19□□□□□ -1.9
SHMT2P34897 AC005300.1-201ENST00000428401 373 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 AC006946.1-201ENST00000429106 328 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.19□□□□□ -1.9
SHMT2P34897 ATP5C1P1-201ENST00000441945 895 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 RPL7P59-201ENST00000447700 943 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 Z99714.1-201ENST00000450463 807 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 RN7SL807P-201ENST00000470923 297 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SHMT2P34897 HMGB1P38-201ENST00000490557 577 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 AC021678.1-201ENST00000505195 936 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 AC118282.2-201ENST00000508739 374 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.19□□□□□ -1.9
SHMT2P34897 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.19□□□□□ -1.9
SHMT2P34897 AC093331.1-201ENST00000521474 169 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.19□□□□□ -1.9
SHMT2P34897 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.19□□□□□ -1.9
SHMT2P34897 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SHMT2P34897 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SHMT2P34897 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.19□□□□□ -1.9
SHMT2P34897 AC010735.1-201ENST00000567305 1026 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.19□□□□□ -1.9
SHMT2P34897 BNIP3P22-201ENST00000593399 556 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 VN1R87P-201ENST00000596706 487 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.19□□□□□ -1.9
SHMT2P34897 AL031985.2-201ENST00000600955 480 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.19□□□□□ -1.9
SHMT2P34897 AL365400.2-201ENST00000605604 902 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 AC099785.1-201ENST00000605697 437 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 HMGN2P28-201ENST00000606102 262 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.19□□□□□ -1.9
SHMT2P34897 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.19□□□□□ -1.9
SHMT2P34897 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SHMT2P34897 PLCE1P1-201ENST00000622094 305 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.19□□□□□ -1.9
SHMT2P34897 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.19□□□□□ -1.9
SHMT2P34897 AC068620.4-201ENST00000636730 1182 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 AL359893.1-201ENST00000447628 1580 ntBASIC3.19□□□□□ -1.9
SHMT2P34897 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
SHMT2P34897 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHMT2P34897 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SHMT2P34897 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SHMT2P34897 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
SHMT2P34897 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.18□□□□□ -1.9
SHMT2P34897 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
SHMT2P34897 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.18□□□□□ -1.9
SHMT2P34897 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SHMT2P34897 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SHMT2P34897 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SHMT2P34897 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SHMT2P34897 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SHMT2P34897 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SHMT2P34897 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms