Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.66□□□□□ -1.82
CHRNA3P32297 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
CHRNA3P32297 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CHRNA3P32297 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CHRNA3P32297 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.66□□□□□ -1.82
CHRNA3P32297 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
CHRNA3P32297 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.65□□□□□ -1.82
CHRNA3P32297 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CHRNA3P32297 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CHRNA3P32297 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CHRNA3P32297 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
CHRNA3P32297 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CHRNA3P32297 SNORD116-23-201ENST00000384645 92 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 MTND4LP20-201ENST00000402379 270 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 RNU4-78P-201ENST00000410940 126 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.65□□□□□ -1.83
CHRNA3P32297 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.65□□□□□ -1.83
CHRNA3P32297 GLRXP1-201ENST00000423261 334 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.65□□□□□ -1.83
CHRNA3P32297 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.65□□□□□ -1.83
CHRNA3P32297 CYCSP4-201ENST00000429682 331 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 MTCYBP15-201ENST00000433123 1127 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.65□□□□□ -1.83
CHRNA3P32297 AC073063.1-201ENST00000434352 607 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 RPS7P2-201ENST00000435134 607 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 RPL21P23-201ENST00000446654 460 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 HMGN2P16-201ENST00000456802 261 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 snoU13.24-201ENST00000458998 104 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 RPL7P47-201ENST00000497299 556 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CHRNA3P32297 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CHRNA3P32297 FABP5P12-201ENST00000515543 389 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.65□□□□□ -1.83
CHRNA3P32297 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.65□□□□□ -1.83
CHRNA3P32297 YWHAZP1-201ENST00000556286 722 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.65□□□□□ -1.83
CHRNA3P32297 AC093519.1-201ENST00000566109 298 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.65□□□□□ -1.83
CHRNA3P32297 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
CHRNA3P32297 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.65□□□□□ -1.83
CHRNA3P32297 AC006116.10-201ENST00000591836 581 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 AP001542.2-201ENST00000593141 364 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 AC091057.3-201ENST00000602684 733 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 GAS5-AS1-201ENST00000602767 694 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CHRNA3P32297 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.65□□□□□ -1.83
CHRNA3P32297 AC243312.2-201ENST00000623340 601 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 AP001002.2-201ENST00000625137 386 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 U6.98-201ENST00000637157 84 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 AC244258.1-201ENST00000637553 1071 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CHRNA3P32297 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.65□□□□□ -1.83
CHRNA3P32297 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CHRNA3P32297 AL513302.2-201ENST00000562313 1842 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CHRNA3P32297 AL365440.1-201ENST00000436135 2167 ntBASIC3.65□□□□□ -1.83
CHRNA3P32297 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHRNA3P32297 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.64□□□□□ -1.83
CHRNA3P32297 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.64□□□□□ -1.83
CHRNA3P32297 OTUD4P1-201ENST00000237841 3067 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CHRNA3P32297 RNU6-582P-201ENST00000362989 107 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 RNU6-251P-201ENST00000363235 104 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 RNU6-839P-201ENST00000363347 108 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
CHRNA3P32297 RNU6-821P-201ENST00000390995 107 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CHRNA3P32297 RNU6-575P-201ENST00000411326 105 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 RPS7P13-201ENST00000413955 498 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 FNDC3CP-201ENST00000420795 1155 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.64□□□□□ -1.83
CHRNA3P32297 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.64□□□□□ -1.83
CHRNA3P32297 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.64□□□□□ -1.83
CHRNA3P32297 RPL23AP82-202ENST00000427528 469 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 AC006946.1-201ENST00000429106 328 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.64□□□□□ -1.83
CHRNA3P32297 AL662791.1-201ENST00000441992 928 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.64□□□□□ -1.83
CHRNA3P32297 CENPBD1P1-201ENST00000464061 469 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 RPL23AP67-201ENST00000465341 474 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 AC010285.1-201ENST00000470580 392 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.64□□□□□ -1.83
CHRNA3P32297 AC004024.1-201ENST00000549244 247 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
CHRNA3P32297 AC010735.1-201ENST00000567305 1026 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.64□□□□□ -1.83
CHRNA3P32297 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.64□□□□□ -1.83
CHRNA3P32297 MIR3944-201ENST00000581277 108 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.64□□□□□ -1.83
CHRNA3P32297 AC069200.1-201ENST00000609511 323 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.64□□□□□ -1.83
CHRNA3P32297 AL050303.3-201ENST00000613704 284 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 VN1R7P-201ENST00000619242 903 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 AC012314.7-201ENST00000619693 93 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 AC015967.1-201ENST00000619893 476 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 AL392088.2-201ENST00000637607 285 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHRNA3P32297 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
CHRNA3P32297 AC004925.1-201ENST00000624256 2706 ntBASIC3.64□□□□□ -1.83
CHRNA3P32297 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms